G675444


Basic Information

Item Value
gene id G675444
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 13580757 ~ 13581314 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU769369
aatgtatttcatcTACTTGTTGCGGCTACGTACGTACATAAACGATTTCAAAGAACTGCAGCTGTAGGCAGTTAACTCTTTTGAAGTGGCTAAAATAAagcattgatgttgtttttcTCATTGACTGTTCATGAATTGTTTGGAGATTTTGCTCAATCATGTAAATCACTGAGAACACATTTATAATAGACCACAGCCTTATGCAAAAACATGCTTCTTACTTATCTTGATCTCATTTGACAGGGCTTTCCATTAATGATGACCAAGACAGTAATTTCATATGTGTGCTGCACAGTGTGTGGTGGTAGGTAAGGTTTGAGGTGACATCTCAGTGAAATTAAATATGTGACACTAGCAAGGTTTCAATACAACtgacgacagattttcatgcacaTACTGTAAAGCGTGAAGACAATATGCACACTTTTCCACCAGTGGTGTTGCCAGCAAacagacttgttgcagataaaaatcagtgcttgatgacgtagtacacacaCAATGTAATTTTTTGCTTAAGTTTTCATGTCCCTAATTAAAAACCATAAAGTTCAATGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU769369 True 558 lncRNA 0.36 1 13580757 13581314

Neighbor

gene id symbol gene type direction distance location
hsp90ab1 hsp90ab1 coding downstream 22006 13552248 ~ 13558751 (-)
tmem151ba tmem151b coding downstream 71423 13496434 ~ 13509334 (-)
LOC110529426 NA coding downstream 196302 13373030 ~ 13451428 (-)
LOC110529423 LOC106571212 coding downstream 249497 13320455 ~ 13331260 (-)
LOC110529421 NA coding downstream 416060 13159465 ~ 13164697 (-)
LOC110529434 LOC106571223 coding upstream 17062 13598376 ~ 13601561 (-)
LOC110529435 LOC106571224 coding upstream 45447 13626761 ~ 13632856 (-)
LOC110529441 LOC106571256 coding upstream 759186 14340500 ~ 14392658 (-)
LOC110529444 LOC106571255 coding upstream 814697 14396011 ~ 14471129 (-)
LOC110529446 LOC106571252 coding upstream 968367 14549681 ~ 14573584 (-)
G675443 NA non-coding downstream 478 13580065 ~ 13580279 (-)
G675442 NA non-coding downstream 1829 13578607 ~ 13578928 (-)
G675440 NA non-coding downstream 8429 13571623 ~ 13572328 (-)
G675439 NA non-coding downstream 9943 13570565 ~ 13570814 (-)
G675435 NA non-coding downstream 18657 13561891 ~ 13562100 (-)
G675380 NA non-coding upstream 34 13581348 ~ 13581714 (-)
G675445 NA non-coding upstream 568 13581882 ~ 13582185 (-)
G675449 LOC100136058 non-coding upstream 14923 13596237 ~ 13597119 (-)
G675451 NA non-coding upstream 15897 13597211 ~ 13597518 (-)
G675458 NA non-coding upstream 27250 13608564 ~ 13609028 (-)
G675415 NA other downstream 94620 13485679 ~ 13486137 (-)
G675413 NA other downstream 95823 13484093 ~ 13484934 (-)
lpgat1 lpgat1 other downstream 883434 12615879 ~ 12697323 (-)
G674015 NA other downstream 1296537 12283837 ~ 12284220 (-)
G675834 LOC106571238 other upstream 402312 13983626 ~ 13986108 (-)
G676077 NA other upstream 625673 14206987 ~ 14207625 (-)
G676178 NA other upstream 706535 14287849 ~ 14288345 (-)
G676635 LOC106571254 other upstream 930276 14508329 ~ 14516528 (-)
G679087 NA other upstream 2851307 16432621 ~ 16433014 (-)

Expression


Co-expression Network