G675380



Basic Information


Item Value
gene id G675380
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 13581348 ~ 13581714 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU769298
GTCTAATCTAGTCTTACTATCCGCAGAATGGTGATCTGAGAGCAGCAGGATAATAATCTAAAATGAAATGCAGTGGGAAAAGGAAGCACATGAGAATGATTCCACTTTTTCAACTAACTCGATTTTGAATCATCAAGCCAGCTCAGAAGTCTCTTGATCCCTAGTCCAACACATAGTAAGAGCGCCCCCTTGTGTCCTTGTTGTAATTGCATGTACTGCATAATGAATGCCTGACTGCTTAGGAATTAGTCCAAACAAAAATAAAGGTACACTAGCATCATTTTGAAGCCTTTGAGTTGACCTAGAATACAACCCACACAGGATATAATGCTGCGATTGTCAGTCTGGTATCTCCAGTATCTTCCTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU769298 True 367 lncRNA 0.41 1 13581348 13581714

Neighbor


gene id symbol gene type direction distance location
hsp90ab1 hsp90ab1 coding downstream 22597 13552248 ~ 13558751 (-)
tmem151ba tmem151b coding downstream 72014 13496434 ~ 13509334 (-)
LOC110529426 NA coding downstream 196893 13373030 ~ 13451428 (-)
LOC110529423 LOC106571212 coding downstream 250088 13320455 ~ 13331260 (-)
LOC110529421 NA coding downstream 416651 13159465 ~ 13164697 (-)
LOC110529434 LOC106571223 coding upstream 16662 13598376 ~ 13601561 (-)
LOC110529435 LOC106571224 coding upstream 45047 13626761 ~ 13632856 (-)
LOC110529441 LOC106571256 coding upstream 758786 14340500 ~ 14392658 (-)
LOC110529444 LOC106571255 coding upstream 814297 14396011 ~ 14471129 (-)
LOC110529446 LOC106571252 coding upstream 967967 14549681 ~ 14573584 (-)
G675444 NA non-coding downstream 34 13580757 ~ 13581314 (-)
G675443 NA non-coding downstream 1069 13580065 ~ 13580279 (-)
G675442 NA non-coding downstream 2420 13578607 ~ 13578928 (-)
G675440 NA non-coding downstream 9020 13571623 ~ 13572328 (-)
G675439 NA non-coding downstream 10534 13570565 ~ 13570814 (-)
G675445 NA non-coding upstream 168 13581882 ~ 13582185 (-)
G675449 LOC100136058 non-coding upstream 14523 13596237 ~ 13597119 (-)
G675451 NA non-coding upstream 15497 13597211 ~ 13597518 (-)
G675458 NA non-coding upstream 26850 13608564 ~ 13609028 (-)
G675463 NA non-coding upstream 32505 13614219 ~ 13614428 (-)
G675415 NA other downstream 95211 13485679 ~ 13486137 (-)
G675413 NA other downstream 96414 13484093 ~ 13484934 (-)
lpgat1 lpgat1 other downstream 884025 12615879 ~ 12697323 (-)
G674015 NA other downstream 1297128 12283837 ~ 12284220 (-)
G675834 LOC106571238 other upstream 401912 13983626 ~ 13986108 (-)
G676077 NA other upstream 625273 14206987 ~ 14207625 (-)
G676178 NA other upstream 706135 14287849 ~ 14288345 (-)
G676635 LOC106571254 other upstream 929876 14508329 ~ 14516528 (-)
G679087 NA other upstream 2850907 16432621 ~ 16433014 (-)

Expression



Co-expression Network