Gene
RNA
| Item | Value |
|---|---|
| gene id | G676649 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 14533213 ~ 14533441 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb2 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU770694 | True | 229 | lncRNA | 0.48 | 1 | 14533213 | 14533441 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529444 | LOC106571255 | coding | downstream | 62084 | 14396011 ~ 14471129 (-) |
| LOC110529441 | LOC106571256 | coding | downstream | 140555 | 14340500 ~ 14392658 (-) |
| LOC110529435 | LOC106571224 | coding | downstream | 900357 | 13626761 ~ 13632856 (-) |
| LOC110529434 | LOC106571223 | coding | downstream | 931652 | 13598376 ~ 13601561 (-) |
| hsp90ab1 | hsp90ab1 | coding | downstream | 974462 | 13552248 ~ 13558751 (-) |
| LOC110529446 | LOC106571252 | coding | upstream | 16240 | 14549681 ~ 14573584 (-) |
| LOC110529453 | LOC105017813 | coding | upstream | 190331 | 14723772 ~ 14748569 (-) |
| LOC110529452 | LOC106571249 | coding | upstream | 222550 | 14755991 ~ 14850443 (-) |
| LOC110529455 | LOC106571248 | coding | upstream | 355356 | 14888797 ~ 14901607 (-) |
| LOC110529190 | LOC106571247 | coding | upstream | 375434 | 14908875 ~ 14965313 (-) |
| G676648 | NA | non-coding | downstream | 261 | 14532700 ~ 14532952 (-) |
| G676646 | NA | non-coding | downstream | 962 | 14529486 ~ 14532251 (-) |
| G676645 | NA | non-coding | downstream | 3759 | 14529228 ~ 14529454 (-) |
| G676635 | LOC106571254 | non-coding | downstream | 22785 | 14508329 ~ 14516528 (-) |
| G676629 | NA | non-coding | downstream | 46554 | 14486150 ~ 14486659 (-) |
| G676691 | NA | non-coding | upstream | 69074 | 14602515 ~ 14602782 (-) |
| G676696 | NA | non-coding | upstream | 82244 | 14615685 ~ 14746960 (-) |
| G676705 | NA | non-coding | upstream | 99752 | 14633193 ~ 14635877 (-) |
| G676717 | NA | non-coding | upstream | 143513 | 14676954 ~ 14684085 (-) |
| G676722 | tieg3 | non-coding | upstream | 160425 | 14693866 ~ 14695835 (-) |
| G676178 | NA | other | downstream | 244868 | 14287849 ~ 14288345 (-) |
| G676077 | NA | other | downstream | 325588 | 14206987 ~ 14207625 (-) |
| G675834 | LOC106571238 | other | downstream | 547105 | 13983626 ~ 13986108 (-) |
| G675415 | NA | other | downstream | 1047076 | 13485679 ~ 13486137 (-) |
| G679087 | NA | other | upstream | 1899180 | 16432621 ~ 16433014 (-) |
| G679210 | LOC106571290 | other | upstream | 2091649 | 16625090 ~ 16630259 (-) |
| G679471 | NA | other | upstream | 2580102 | 17113543 ~ 17114528 (-) |
| G681659 | NA | other | upstream | 4257789 | 18791230 ~ 18792137 (-) |
| G684844 | NA | other | upstream | 6945325 | 21478766 ~ 21479203 (-) |
