G676717


Basic Information

Item Value
gene id G676717
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 14676954 ~ 14684085 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU770775
TGATATAATTTAACGGATATTTTTGTGACACAATAGTTTGTAATCACAAAAATTATCACACAACCACTTTACCGTCTCCAAAGCACTTAtcattcataaaaaaaaaaaaatctctgttGTATCACAAACGTTGTGCCAAAAATTGTACATCAGTTGTACAACTTGTGTGTACGTGCCTAAGTGTCTTTAAAAACCGGACTGCATGATGTTCAGGACTAAAAGAGCCGTGAGAAAGATAGTTCTCAGGCAGATTTTATTTGACCTTCTCTATCTAGAGGGCTATAAAACACTCTCTGATGTTGTTCTGTTCCttttatagtgtactacttttgaccagagccctattcaccAAATCTGCACAATCTGTGCTTCATGCAACTCGGTTCTCCTACAAAACACACAatgtccaaataaatgcttagtTTGAAGAATGACTTTTAACAAATTTAATAACCACTGTGGGTAAGCATCTGCTGACAGGACTGACTCCAAATCGAGTCAGTCCAAATTGAAACATTAACACACACTTTGACCCCAACCCTCATTTCCTGTTGCAAAGAAATATTCACATTCGGTCATCTCAAAACATTGTGTTGCCACCTATAAATCTacgttcagacacacacaaaatagcacaaaatgttcaaaatgtaaatataaatacatagCTATAATTTAATTCATATCCCTTTTTTCATGATTTAAACTTACAAAAAATAAAATCATCACATAGAGTTAATAAATATAAAAAGTACTGACAGAAATAGCCAGTCACCGCATCATGTTTTACATATCTTTgaaatatacagtatcagtcaaacgtttggacacactgTCAGTCTATCTAAAAGATAGtgaaggagtcaggcgcaggacacagataAGAGTAACAATCACTGATTTACTCAATCCAAAACGTAACGAAATCCCGTTCCAAACAAGGACAAAACCGGACTCAAAATATAACACACCAGCAatacACGAAagacaatcacacacaaaacagaaagggaaaccagagggtaaaataaggaacataattatgagaagggaaccaggtgtgtaaaacagacaaaacaaaaggaaaaatgaaacatggatcggtggcggctagaaagccggtgatgtCGACTGCcgaaacgccgcccgaacaaggagagggaacaactttggtggaagtcgtgacacacacctactcattcaagggttttttctttatttttactattttctacattgtagaataatagtgaagacataaaaacgatgaaataacacatatggaatcatgtagtaaccaaaaaagtgttaaacaagtcaacatgttttatattttagattctccaaagtagcttttccaacattcttgaaggagttcccacatatgctgagcacttgtccgctgcttttacttcactctgcggtctaactcatcccaaaccatttcaattgggttgaggtcgggtgattgtgcaggccaggtcatctgatgcagcactccataactctccttcttggtcaaataggccgtaaagcctggaggtgtgttttgggtgattgtcctgttgaaaaacaaatgatagtcccactaagcgcaaaacagatggggtggcgaatcgctgcagaatgctgtggtagccatgctggttaagtgtgccttgaattctaaataaatcacagacagtgtcaccagcaaagcacccccacacctcctcctccttcaccgtgggaaccacacatgcggagatcatccgttcacctactctgcgtccaCGGCaggtggaaccaaaaatctcaaattttaactcatcagaccaaaggtcagatttccaccggtctaatgtccattgctcgtgtttcttggcccaagcaagtctcttcttattattggtgtcctttagtagtggtttctttgcagcaattcggccaagaaggcctgattcacacagtctcctctaaacagatgatgttgagatgtctgttatttgaactctgtgaaacatttgggctgcaatttctgaggctggtaacttatgagcttatcctctgcagcagaggtacagtgccttgcgaaagtattcggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU770775 True 2084 lncRNA 0.40 2 14676954 14684085

Neighbor

gene id symbol gene type direction distance location
LOC110529446 LOC106571252 coding downstream 103370 14549681 ~ 14573584 (-)
LOC110529444 LOC106571255 coding downstream 205825 14396011 ~ 14471129 (-)
LOC110529441 LOC106571256 coding downstream 284296 14340500 ~ 14392658 (-)
LOC110529435 LOC106571224 coding downstream 1044098 13626761 ~ 13632856 (-)
LOC110529434 LOC106571223 coding downstream 1075393 13598376 ~ 13601561 (-)
LOC110529453 LOC105017813 coding upstream 39687 14723772 ~ 14748569 (-)
LOC110529452 LOC106571249 coding upstream 71906 14755991 ~ 14850443 (-)
LOC110529455 LOC106571248 coding upstream 204712 14888797 ~ 14901607 (-)
LOC110529190 LOC106571247 coding upstream 224790 14908875 ~ 14965313 (-)
LOC110529456 LOC106571246 coding upstream 287529 14971614 ~ 14980854 (-)
G676705 NA non-coding downstream 41077 14633193 ~ 14635877 (-)
G676691 NA non-coding downstream 74172 14602515 ~ 14602782 (-)
G676649 NA non-coding downstream 143513 14533213 ~ 14533441 (-)
G676648 NA non-coding downstream 144002 14532700 ~ 14532952 (-)
G676646 NA non-coding downstream 144703 14529486 ~ 14532251 (-)
G676722 tieg3 non-coding upstream 9781 14693866 ~ 14695835 (-)
G676753 NA non-coding upstream 41591 14725676 ~ 14725935 (-)
G676771 NA non-coding upstream 89941 14774026 ~ 14774552 (-)
G676822 NA non-coding upstream 200277 14884362 ~ 14887465 (-)
G677114 NA non-coding upstream 349175 15033260 ~ 15033545 (-)
G676635 LOC106571254 other downstream 160426 14508329 ~ 14516528 (-)
G676178 NA other downstream 388609 14287849 ~ 14288345 (-)
G676077 NA other downstream 469329 14206987 ~ 14207625 (-)
G675834 LOC106571238 other downstream 690846 13983626 ~ 13986108 (-)
G675415 NA other downstream 1190817 13485679 ~ 13486137 (-)
G679087 NA other upstream 1748536 16432621 ~ 16433014 (-)
G679210 LOC106571290 other upstream 1941005 16625090 ~ 16630259 (-)
G679471 NA other upstream 2429458 17113543 ~ 17114528 (-)
G681659 NA other upstream 4107145 18791230 ~ 18792137 (-)
G684844 NA other upstream 6794681 21478766 ~ 21479203 (-)

Expression


Co-expression Network