G677007


Basic Information

Item Value
gene id G677007
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 15155225 ~ 15155520 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU771127
AATATGGACAGATAAGATGGATACTTTGCCATTTCATTGGTGAGCCTCTTCACATTCCTCTCACCTGTGTGGTCTTCCCCTCTTAGTCTGCATTAACCTCTAACAAGACCTCTCCATGTTCTCTGTGCATTAGTGCAGGGTCAGCCAGTGTGTCTGTCCCCAAGGGTCACTGCAACCAGGACACAGGGATAAAGTGTTCCCCACTAGAGGGATTACCACTGTGTCTGCCtcccaaatgataccctattccctatatagggcactacttttccctatatagtgcattactcaaaagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU771127 True 296 lncRNA 0.47 1 15155225 15155520

Neighbor

gene id symbol gene type direction distance location
LOC110529462 LOC106571241 coding upstream 17040 15135212 ~ 15138185 (+)
LOC110529460 NA coding upstream 31175 15119099 ~ 15124050 (+)
LOC110529458 LOC106571242 coding upstream 50117 15039114 ~ 15105108 (+)
LOC110529454 LOC106571249 coding upstream 398104 14749575 ~ 14758924 (+)
LOC110529451 rir2 coding upstream 448405 14698367 ~ 14706820 (+)
LOC110529464 LOC106571299 coding downstream 102791 15258311 ~ 15260331 (+)
nkx2.1b nkx2.1b coding downstream 119108 15274628 ~ 15276931 (+)
crnkl1 LOC106571265 coding downstream 321434 15476954 ~ 15483621 (+)
LOC110529475 LOC106571272 coding downstream 699102 15854622 ~ 15888522 (+)
LOC110529476 LOC106571274 coding downstream 737056 15892576 ~ 16023051 (+)
G676924 ndufaf7 non-coding upstream 39292 15111645 ~ 15115933 (+)
G676919 NA non-coding upstream 48082 15105603 ~ 15107143 (+)
G676966 NA non-coding upstream 95412 15059488 ~ 15059813 (+)
G676948 NA non-coding upstream 121944 15033058 ~ 15033281 (+)
G676940 NA non-coding upstream 132554 15022346 ~ 15022671 (+)
G677008 NA non-coding downstream 903 15156423 ~ 15156632 (+)
G677014 NA non-coding downstream 10889 15166409 ~ 15166776 (+)
G677079 LOC102780604 non-coding downstream 138193 15293713 ~ 15323741 (+)
G677277 NA non-coding downstream 170811 15326331 ~ 15326560 (+)
G677279 NA non-coding downstream 172145 15327665 ~ 15328044 (+)
G676226 NA other upstream 792254 14360577 ~ 14362971 (+)
G675705 NA other upstream 1298943 13855660 ~ 13856282 (+)
G675607 NA other upstream 1379953 13774672 ~ 13775272 (+)
G678417 LOC106571283 other downstream 1229282 16384802 ~ 16385945 (+)
LOC110529493 LOC106571284 other downstream 1231930 16387411 ~ 16390869 (+)
LOC110529505 LOC106571335 other downstream 1737639 16893102 ~ 16921697 (+)
G681909 NA other downstream 4008416 19163936 ~ 19165640 (+)

Expression


Co-expression Network