G677280


Basic Information

Item Value
gene id G677280
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 15328585 ~ 15328825 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU771495
ttgtgctatttatcactgactactttgtgtcaaagttgaacaaggactctctcctcaccagtatcatgatcaaagatatgatcaagagcctcacatacactATAtcatttggtcattgtgctgccacagaaggAATTGTgtgcaaggcctcaaaaaagatTCATATATCAGAGCTgtgagaaaagttctatatattattgaaacaatgttgtgattgtttgtgagaatgccaacaggtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU771495 True 241 lncRNA 0.37 1 15328585 15328825

Neighbor

gene id symbol gene type direction distance location
nkx2.1b nkx2.1b coding upstream 51654 15274628 ~ 15276931 (+)
LOC110529464 LOC106571299 coding upstream 68254 15258311 ~ 15260331 (+)
LOC110529462 LOC106571241 coding upstream 190400 15135212 ~ 15138185 (+)
LOC110529460 NA coding upstream 204535 15119099 ~ 15124050 (+)
LOC110529458 LOC106571242 coding upstream 223477 15039114 ~ 15105108 (+)
crnkl1 LOC106571265 coding downstream 148129 15476954 ~ 15483621 (+)
LOC110529475 LOC106571272 coding downstream 525797 15854622 ~ 15888522 (+)
LOC110529476 LOC106571274 coding downstream 563751 15892576 ~ 16023051 (+)
trnaa-ugc-22 NA coding downstream 634744 15963569 ~ 15963643 (+)
LOC110529479 nt5e coding downstream 906942 16235767 ~ 16246138 (+)
G677279 NA non-coding upstream 541 15327665 ~ 15328044 (+)
G677277 NA non-coding upstream 2025 15326331 ~ 15326560 (+)
G677079 LOC102780604 non-coding upstream 4844 15293713 ~ 15323741 (+)
G677014 NA non-coding upstream 161809 15166409 ~ 15166776 (+)
G677008 NA non-coding upstream 171953 15156423 ~ 15156632 (+)
G677281 NA non-coding downstream 562 15329387 ~ 15329625 (+)
G677286 NA non-coding downstream 3648 15332473 ~ 15332710 (+)
G677288 LOC100194703 non-coding downstream 5120 15333945 ~ 15334167 (+)
G677297 NA non-coding downstream 18453 15347278 ~ 15347509 (+)
G677483 NA non-coding downstream 166404 15495229 ~ 15495469 (+)
G676919 NA other upstream 221442 15105603 ~ 15107143 (+)
LOC110529454 LOC106571249 other upstream 569661 14749575 ~ 14758924 (+)
G676226 NA other upstream 965614 14360577 ~ 14362971 (+)
G675705 NA other upstream 1472303 13855660 ~ 13856282 (+)
G678417 LOC106571283 other downstream 1055977 16384802 ~ 16385945 (+)
LOC110529493 LOC106571284 other downstream 1058625 16387411 ~ 16390869 (+)
LOC110529505 LOC106571335 other downstream 1564334 16893102 ~ 16921697 (+)
G681909 NA other downstream 3835111 19163936 ~ 19165640 (+)
G682611 NA other downstream 4400008 19728833 ~ 19729671 (+)

Expression


Co-expression Network