G677286


Basic Information

Item Value
gene id G677286
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 15332473 ~ 15332710 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU771501
ggctttgttactttggtcccagctctctgcaggtcattcactaggtccccccgtgtggttctgggatttttgctcactgttcttgtgatcattttgaccccacggggtgagatcttgcgtggagccccagatcaagggagattatcagtggtcttgtatgtcttccatttcctaataattgctcccacagttgatttcttcaaaccaagctgcttacctattgcagattcagtcttcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU771501 True 238 lncRNA 0.47 1 15332473 15332710

Neighbor

gene id symbol gene type direction distance location
nkx2.1b nkx2.1b coding upstream 55542 15274628 ~ 15276931 (+)
LOC110529464 LOC106571299 coding upstream 72142 15258311 ~ 15260331 (+)
LOC110529462 LOC106571241 coding upstream 194288 15135212 ~ 15138185 (+)
LOC110529460 NA coding upstream 208423 15119099 ~ 15124050 (+)
LOC110529458 LOC106571242 coding upstream 227365 15039114 ~ 15105108 (+)
crnkl1 LOC106571265 coding downstream 144244 15476954 ~ 15483621 (+)
LOC110529475 LOC106571272 coding downstream 521912 15854622 ~ 15888522 (+)
LOC110529476 LOC106571274 coding downstream 559866 15892576 ~ 16023051 (+)
trnaa-ugc-22 NA coding downstream 630859 15963569 ~ 15963643 (+)
LOC110529479 nt5e coding downstream 903057 16235767 ~ 16246138 (+)
G677281 NA non-coding upstream 2848 15329387 ~ 15329625 (+)
G677280 NA non-coding upstream 3648 15328585 ~ 15328825 (+)
G677279 NA non-coding upstream 4429 15327665 ~ 15328044 (+)
G677277 NA non-coding upstream 5913 15326331 ~ 15326560 (+)
G677079 LOC102780604 non-coding upstream 8732 15293713 ~ 15323741 (+)
G677288 LOC100194703 non-coding downstream 1235 15333945 ~ 15334167 (+)
G677297 NA non-coding downstream 14568 15347278 ~ 15347509 (+)
G677483 NA non-coding downstream 162519 15495229 ~ 15495469 (+)
G677485 NA non-coding downstream 167272 15499982 ~ 15500208 (+)
G677488 NA non-coding downstream 170889 15503599 ~ 15584266 (+)
G676919 NA other upstream 225330 15105603 ~ 15107143 (+)
LOC110529454 LOC106571249 other upstream 573549 14749575 ~ 14758924 (+)
G676226 NA other upstream 969502 14360577 ~ 14362971 (+)
G675705 NA other upstream 1476191 13855660 ~ 13856282 (+)
G678417 LOC106571283 other downstream 1052092 16384802 ~ 16385945 (+)
LOC110529493 LOC106571284 other downstream 1054740 16387411 ~ 16390869 (+)
LOC110529505 LOC106571335 other downstream 1560449 16893102 ~ 16921697 (+)
G681909 NA other downstream 3831226 19163936 ~ 19165640 (+)
G682611 NA other downstream 4396123 19728833 ~ 19729671 (+)

Expression


Co-expression Network