Gene
RNA
| Item | Value |
|---|---|
| gene id | G677483 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 15495229 ~ 15495469 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU771705 | True | 241 | lncRNA | 0.36 | 1 | 15495229 | 15495469 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| crnkl1 | LOC106571265 | coding | upstream | 11608 | 15476954 ~ 15483621 (+) |
| nkx2.1b | nkx2.1b | coding | upstream | 218298 | 15274628 ~ 15276931 (+) |
| LOC110529464 | LOC106571299 | coding | upstream | 234898 | 15258311 ~ 15260331 (+) |
| LOC110529462 | LOC106571241 | coding | upstream | 357044 | 15135212 ~ 15138185 (+) |
| LOC110529460 | NA | coding | upstream | 371179 | 15119099 ~ 15124050 (+) |
| LOC110529475 | LOC106571272 | coding | downstream | 359153 | 15854622 ~ 15888522 (+) |
| LOC110529476 | LOC106571274 | coding | downstream | 397107 | 15892576 ~ 16023051 (+) |
| trnaa-ugc-22 | NA | coding | downstream | 468100 | 15963569 ~ 15963643 (+) |
| LOC110529479 | nt5e | coding | downstream | 740298 | 16235767 ~ 16246138 (+) |
| bub1 | LOC100306849 | coding | downstream | 797852 | 16293321 ~ 16301586 (+) |
| G677297 | NA | non-coding | upstream | 147720 | 15347278 ~ 15347509 (+) |
| G677288 | LOC100194703 | non-coding | upstream | 161062 | 15333945 ~ 15334167 (+) |
| G677286 | NA | non-coding | upstream | 162519 | 15332473 ~ 15332710 (+) |
| G677281 | NA | non-coding | upstream | 165604 | 15329387 ~ 15329625 (+) |
| G677280 | NA | non-coding | upstream | 166404 | 15328585 ~ 15328825 (+) |
| G677485 | NA | non-coding | downstream | 4513 | 15499982 ~ 15500208 (+) |
| G677488 | NA | non-coding | downstream | 8130 | 15503599 ~ 15584266 (+) |
| G677539 | NA | non-coding | downstream | 92886 | 15588355 ~ 15588848 (+) |
| G677648 | NA | non-coding | downstream | 134129 | 15629598 ~ 15684714 (+) |
| G678305 | NA | non-coding | downstream | 659081 | 16154550 ~ 16154784 (+) |
| G676919 | NA | other | upstream | 388086 | 15105603 ~ 15107143 (+) |
| LOC110529454 | LOC106571249 | other | upstream | 736305 | 14749575 ~ 14758924 (+) |
| G676226 | NA | other | upstream | 1132258 | 14360577 ~ 14362971 (+) |
| G675705 | NA | other | upstream | 1638947 | 13855660 ~ 13856282 (+) |
| G678417 | LOC106571283 | other | downstream | 889333 | 16384802 ~ 16385945 (+) |
| LOC110529493 | LOC106571284 | other | downstream | 891981 | 16387411 ~ 16390869 (+) |
| LOC110529505 | LOC106571335 | other | downstream | 1397690 | 16893102 ~ 16921697 (+) |
| G681909 | NA | other | downstream | 3668467 | 19163936 ~ 19165640 (+) |
| G682611 | NA | other | downstream | 4233364 | 19728833 ~ 19729671 (+) |
