XLOC_026051 (BX004785.2)


Basic Information

Item Value
gene id XLOC_026051
gene name BX004785.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 6278752 ~ 6281503 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050945
agtgtgtttgttgattGACTCACAGCAGACGTACAGCTCCACAACACATACAGCACCCTGGAGAAATCAACAGGACTGACGAATCTTTTACAGGAGCATGAATAGATGCCTGGAGTCAGACAAGATGATCAGGGTGGGCAGAAGCAGTCCAGATCTTGTTCACCCTGACATGAGTGATCTGAGGATCGTTCTTCTGGGGAAAAGCGTGTCAGAAAACAGCGAGGTGGGAAACCTCATCTTGGGCCGATCAGCGTTTGACAGTGAAGCTCCTCCAGGTGTGGTGGAGAGAGTGGGAGGAAGACTGAAGGACAGATATGTGACGCTCATCAACAGTCCTCAGCTGCTCCACACAAACATCTCAGATGACCAGATCACACAGACGGTCAGAGAGTGTGTAAGTCTGTCTGATCCAGGACCTCATGTGGTGGTTCTGCTCCTCCAACATCAGCAGTGTTCAGCAGAAGATCAAGAGcgtgtggagaagctgcaggactCTTTCTCTGAGCGCCTTTTTCAACACACCATGGTGCTCAGCACACAAGAGTCCACTGAACCTAATGAGATCCTGCAGAAAATCATCCAGACGTGCTCAAACAGACACTTCAGTCTTCAGAGAAGCAGCTCTGCTGATGATCTTCTGCAGGCATTTGAGGACATTGAGAAGAACAATGAGGGACGACACCTGATTTCTGCTCAATATGGAGCTTCTAAGTATTTCACAGTGGAGAAACAGGACACACAAACATGTAAGTTTGACCACATCTGTTGTTCCTAGTGATAGATGAACACTGTTTATTGTTCTTCTGCTCTTTCAGACTGTGAGAAGCTGAATATTTTGGTTTGCGGGAGCGACAGCTCTCTGAAATCCTCCATCTCAGAGCTGATCCTGCAACATACACACAGATCAGAGAGGACAGACGTAGTTCTTCATGGTCGTCAGATCAATGTGCTGGAGCTTCCAGCTCTGTTCAACACTGAGCTCTCAGAGAAAGTGATGTGTCAGACTCACCGATGTGTGTCTCTCTGTCATCCTGGAATTCATGTTTTCCTTCTCATTATTCCTGACTCTTCACTCAATAATGAAGACAAAGCAGAAATAGAAGAGATCCAGAATATATTCAGCTCCAGAGTCAACAAACATCTTATGATCCTCATCATGAAGAGCACAGAGAGTCAGACGGAAGAACTTAATGAAGAAACACAGGCTGTCATTGAGAGTTTCGGATGTCGACATAATTTCTTTGGTCCCAAAACACAAGTCTTTACATTGATGGAGGACATTGAGCAGATGCTGAAAGAAAACAGAGGAGCCTTTTTCTCCACAGAGACATTTCTGGAGGCACAGGTGAAAAAACTGATGAAATATGAAGAGATGAAGAAGAAACTTCAATCATTAGAGACAAATCTACTGTCACAAGGTAATGACATTCATTCTACATTCCAGAATGTAagcttttaaaaaactaaagGTCAGAACTTAAGTG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000093487

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050945 True 1484 mRNA 0.45 3 6278752 6281503

Neighbor

gene id symbol gene type direction distance location
XLOC_026050 NA coding downstream 38687 6237098 ~ 6240065 (-)
XLOC_026049 NA coding downstream 50606 6220081 ~ 6228146 (-)
XLOC_026048 NA coding downstream 66792 6203736 ~ 6211960 (-)
XLOC_026047 si:ch73-144l3.1 coding downstream 86802 6178347 ~ 6191950 (-)
XLOC_026046 NA coding downstream 182931 6073491 ~ 6095821 (-)
XLOC_026052 NA coding upstream 27190 6308693 ~ 6376938 (-)
XLOC_026053 jpt1b coding upstream 98657 6380160 ~ 6417328 (-)
XLOC_026054 sumo2b coding upstream 141771 6423274 ~ 6441619 (-)
XLOC_026055 gga3b coding upstream 209017 6490520 ~ 6519760 (-)
XLOC_026056 NA coding upstream 244195 6525698 ~ 6529154 (-)
XLOC_026045 NA non-coding downstream 227676 6046988 ~ 6051076 (-)
XLOC_026058 FP016106.1 non-coding upstream 275457 6556960 ~ 6597195 (-)
XLOC_026064 NA non-coding upstream 769016 7050519 ~ 7077819 (-)
XLOC_026065 NA non-coding upstream 802004 7083507 ~ 7121370 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000255_00172901_00194564 NA coding CI01000255 null 170236 ~ 194667 (+)