G678451


Basic Information

Item Value
gene id G678451
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 16434509 ~ 16434734 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU772822
ttcacaatactgagGATGGATCAGCTCATATAGAGCGATATTACCACatatggctgcaaatattgaggtgGCTTATTTTAATGTTTacacaataaaaatgcacaaagtCACTGATTTGGAACATCATTGAGCAAGATACACATAAGGAACATATTGAGACAAATCCCAGAAAGTAGCCTACATGTAGCAAAATAgaactcaattgattgaacatgaaatCTATTTC

Function

NR:

description
glucoside xylosyltransferase 2-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU772822 True 226 lncRNA 0.34 1 16434509 16434734

Neighbor

gene id symbol gene type direction distance location
LOC118965606 NA coding upstream 2256 16428557 ~ 16432253 (+)
LOC110529494 slc35a1 coding upstream 10538 16413775 ~ 16423971 (+)
cfap206 cfap206 coding upstream 23128 16406235 ~ 16411381 (+)
LOC110529491 LOC106571281 coding upstream 28412 16391231 ~ 16406097 (+)
LOC110529493 LOC106571284 coding upstream 43640 16387411 ~ 16390869 (+)
LOC110529497 LOC106571290 coding downstream 190109 16624843 ~ 16630268 (+)
LOC110529502 LOC106571295 coding downstream 358984 16793718 ~ 16826016 (+)
LOC110529505 LOC106571335 coding downstream 458368 16893102 ~ 16921697 (+)
LOC110529507 LOC106571333 coding downstream 487042 16921776 ~ 16925688 (+)
LOC110529193 NA coding downstream 1245471 17680205 ~ 17681988 (+)
G678449 NA non-coding upstream 1838 16432330 ~ 16432671 (+)
G678326 NA non-coding upstream 154078 16221352 ~ 16280431 (+)
G678333 NA non-coding upstream 268383 16165906 ~ 16166126 (+)
G678332 NA non-coding upstream 269081 16165198 ~ 16165428 (+)
G678453 NA non-coding downstream 2225 16436959 ~ 16437366 (+)
G678455 NA non-coding downstream 3337 16438071 ~ 16438380 (+)
G678442 NA non-coding downstream 20687 16455421 ~ 16458068 (+)
G678464 NA non-coding downstream 23770 16458504 ~ 16458784 (+)
G678466 NA non-coding downstream 25520 16460254 ~ 16460502 (+)
G678417 LOC106571283 other upstream 48564 16384802 ~ 16385945 (+)
LOC110529464 LOC106571299 other upstream 1174519 15258311 ~ 15260331 (+)
G676919 NA other upstream 1327366 15105603 ~ 15107143 (+)
LOC110529454 LOC106571249 other upstream 1675585 14749575 ~ 14758924 (+)
G681909 NA other downstream 2729202 19163936 ~ 19165640 (+)
G682611 NA other downstream 3294099 19728833 ~ 19729671 (+)
G683669 NA other downstream 4128141 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 4192216 20626950 ~ 20632899 (+)

Expression


Co-expression Network