G678453


Basic Information

Item Value
gene id G678453
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 16436959 ~ 16437366 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU772824
ggcgggtgcgggcaccGATCGGTTGAAGaatatgcatttagttttactagtgtATAAgaccagttggaggccacggaaggagtgttgtgtggcattgaagcttgtttggaggtttgttaacacagtgtccaaggaagggccagatgtattcagaatggtgtcatttgcgtagaggtggatcaaagaatcacccgcagcaagagcaacatcattgatatatacagagaacagagtcggcccgagaatttaaccctgtggcacctctatagagactgccagaggtccggacaacaggccctcagatttgacacactgaactctatctgagaattagttagtgaaccaggcgaggcagtcattagagaaaccaaggctgttgactctgccgataagaatacggtaattgac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU772824 True 408 lncRNA 0.47 1 16436959 16437366

Neighbor

gene id symbol gene type direction distance location
LOC118965606 NA coding upstream 4706 16428557 ~ 16432253 (+)
LOC110529494 slc35a1 coding upstream 12988 16413775 ~ 16423971 (+)
cfap206 cfap206 coding upstream 25578 16406235 ~ 16411381 (+)
LOC110529491 LOC106571281 coding upstream 30862 16391231 ~ 16406097 (+)
LOC110529493 LOC106571284 coding upstream 46090 16387411 ~ 16390869 (+)
LOC110529497 LOC106571290 coding downstream 187477 16624843 ~ 16630268 (+)
LOC110529502 LOC106571295 coding downstream 356352 16793718 ~ 16826016 (+)
LOC110529505 LOC106571335 coding downstream 455736 16893102 ~ 16921697 (+)
LOC110529507 LOC106571333 coding downstream 484410 16921776 ~ 16925688 (+)
LOC110529193 NA coding downstream 1242839 17680205 ~ 17681988 (+)
G678451 NA non-coding upstream 2225 16434509 ~ 16434734 (+)
G678449 NA non-coding upstream 4288 16432330 ~ 16432671 (+)
G678326 NA non-coding upstream 156528 16221352 ~ 16280431 (+)
G678333 NA non-coding upstream 270833 16165906 ~ 16166126 (+)
G678455 NA non-coding downstream 705 16438071 ~ 16438380 (+)
G678442 NA non-coding downstream 18055 16455421 ~ 16458068 (+)
G678464 NA non-coding downstream 21138 16458504 ~ 16458784 (+)
G678466 NA non-coding downstream 22888 16460254 ~ 16460502 (+)
G678469 NA non-coding downstream 27202 16464568 ~ 16464850 (+)
G678417 LOC106571283 other upstream 51014 16384802 ~ 16385945 (+)
LOC110529464 LOC106571299 other upstream 1176969 15258311 ~ 15260331 (+)
G676919 NA other upstream 1329816 15105603 ~ 15107143 (+)
LOC110529454 LOC106571249 other upstream 1678035 14749575 ~ 14758924 (+)
G681909 NA other downstream 2726570 19163936 ~ 19165640 (+)
G682611 NA other downstream 3291467 19728833 ~ 19729671 (+)
G683669 NA other downstream 4125509 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 4189584 20626950 ~ 20632899 (+)

Expression


Co-expression Network