G679102


Basic Information

Item Value
gene id G679102
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 16458300 ~ 16458794 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU773526
GACAGATACGGTGTGATAGGGTCAATTTTCTCTGTCTCCACAGCAGAGACAGCCGACTCTGTACACAAACCTTACTTACACTGTGAGCCAATCCCCATGTCCTCCATGCAAAACAGCAGGTGAAGTACAAATATTCCCACCTTGACATTCTGGGGGATGTTACATAAGACATCTATTTTCTCCAGGTTTCAGGTTACTCTGCAGTCTCTGTCACAGGCTTTCCACCTTCGGTGAGTGAAACCTGGTTGTCTGAGGCTCGTTACTCTGTAACCCAATAACACACCCATGGGGTGACGATAGGAGCACTGTCTTAGAAGGTTTGGGGGATGTTTACACTGAGCTCAGCCCTCCCACAGTCAGACACTAGATATCTGTTTTTTCTGTACGATCGTCTGTCCATGGGAGTATCGGCTAAGTGTTAATATAGAGATCCATTTGTCTGAGCCTAGGACCCCCACCTCTCTTCTGTTAGCAGCCATTTCATGTGGCGAGACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU773526 True 495 lncRNA 0.48 1 16458300 16458794

Neighbor

gene id symbol gene type direction distance location
LOC110529495 LOC106571286 coding downstream 13287 16439558 ~ 16445013 (-)
LOC100499588 LOC100499588 coding downstream 31795 16424860 ~ 16426505 (-)
gjb7 LOC106571283 coding downstream 71655 16383314 ~ 16386645 (-)
LOC118965674 NA coding downstream 169668 16288561 ~ 16288632 (-)
LOC118965673 NA coding downstream 169915 16288314 ~ 16288385 (-)
LOC118965497 NA coding upstream 8625 16467419 ~ 16505761 (-)
LOC110529498 LOC106571289 coding upstream 181052 16639846 ~ 16674144 (-)
LOC110529499 LOC106571292 coding upstream 226967 16685761 ~ 16720691 (-)
LOC110529501 LOC106571293 coding upstream 262368 16721162 ~ 16758117 (-)
LOC110529503 lyrm2 coding upstream 367225 16825797 ~ 16830629 (-)
G679089 NA non-coding downstream 23001 16435100 ~ 16435299 (-)
G679081 NA non-coding downstream 46400 16411648 ~ 16411900 (-)
G679080 cfap206 non-coding downstream 46728 16410599 ~ 16411572 (-)
G679078 NA non-coding downstream 49720 16408297 ~ 16408580 (-)
G679076 cfap206 non-coding downstream 50470 16407616 ~ 16407830 (-)
G679104 NA non-coding upstream 2690 16461484 ~ 16461865 (-)
G679105 NA non-coding upstream 3128 16461922 ~ 16462154 (-)
G679107 NA non-coding upstream 4034 16462828 ~ 16463052 (-)
G679332 NA non-coding upstream 360137 16818931 ~ 16821129 (-)
G679087 NA other downstream 25286 16432621 ~ 16433014 (-)
G676635 LOC106571254 other downstream 1941772 14508329 ~ 14516528 (-)
G676178 NA other downstream 2169955 14287849 ~ 14288345 (-)
G676077 NA other downstream 2250675 14206987 ~ 14207625 (-)
G675834 LOC106571238 other downstream 2472192 13983626 ~ 13986108 (-)
G679210 LOC106571290 other upstream 166296 16625090 ~ 16630259 (-)
G679471 NA other upstream 654749 17113543 ~ 17114528 (-)
G681659 NA other upstream 2332436 18791230 ~ 18792137 (-)
G684844 NA other upstream 5019972 21478766 ~ 21479203 (-)
LOC110529207 sprtn other upstream 5461633 21920427 ~ 21926307 (-)

Expression


Co-expression Network