G678746


Basic Information

Item Value
gene id G678746
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 16901303 ~ 16901967 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU773144
aggacatttctccaaaggtatctttgtccccatgtgcagtttcaaaccgtagtctggcttttttatggcggttctggagcagtggcttcttccttgcagagcggcctatcaggttatgtcgatattggactcgttttactgtggatatagatgctttttttacctgtttcctccagcatcttcacaaggtcctttgctgttgttctgggattgattttcacttttctcctacctgggcggtatgacagctgcgtggtcccatggtgtttatacttgcgtactattgtttgtagagatgaacgtggtaccgtaaggcgtttagaaattgctcccaaggatgaaccagacttgtggaggtgtaacaaaaaaaataataaaaaaaaaaattctgaggtcttggctgatttcttttgattttcccatgatgtcaagcaaagaggcattgagtttgaaggtaggccttgaaatacccacaggtacacctccaattgactaatgatgtccattagcctatcagaagcttctaaattaATGacctcattttctggaattttccaagcggtttaaaggcacagtccacTTAATGTATGTAATCTtgtgacctactggaattgtgagcagaactg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU773144 True 626 lncRNA 0.42 2 16901303 16901967

Neighbor

gene id symbol gene type direction distance location
LOC110529502 LOC106571295 coding upstream 75287 16793718 ~ 16826016 (+)
LOC110529497 LOC106571290 coding upstream 271035 16624843 ~ 16630268 (+)
LOC118965606 NA coding upstream 469050 16428557 ~ 16432253 (+)
LOC110529494 slc35a1 coding upstream 477332 16413775 ~ 16423971 (+)
cfap206 cfap206 coding upstream 489922 16406235 ~ 16411381 (+)
LOC110529507 LOC106571333 coding downstream 19809 16921776 ~ 16925688 (+)
LOC110529193 NA coding downstream 778238 17680205 ~ 17681988 (+)
LOC110529511 LOC106571328 coding downstream 780097 17682064 ~ 17701475 (+)
LOC110529515 LOC106571324 coding downstream 923469 17825436 ~ 17833210 (+)
LOC110529518 LOC106571322 coding downstream 943751 17845718 ~ 17857814 (+)
G678616 NA non-coding upstream 189718 16682141 ~ 16711585 (+)
G678618 LOC106571292 non-coding upstream 213790 16685786 ~ 16687513 (+)
G678472 NA non-coding upstream 433793 16467196 ~ 16467510 (+)
G678469 NA non-coding upstream 436453 16464568 ~ 16464850 (+)
G678466 NA non-coding upstream 440801 16460254 ~ 16460502 (+)
G678833 NA non-coding downstream 89139 16991106 ~ 16991589 (+)
G678915 NA non-coding downstream 204182 17106149 ~ 17106450 (+)
G678918 NA non-coding downstream 210361 17112328 ~ 17112646 (+)
G679497 NA non-coding downstream 299258 17201225 ~ 17251687 (+)
G679572 NA non-coding downstream 360050 17262017 ~ 17265145 (+)
LOC110529505 LOC106571335 other upstream 6468 16893102 ~ 16921697 (+)
LOC110529493 LOC106571284 other upstream 512967 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 515358 16384802 ~ 16385945 (+)
LOC110529464 LOC106571299 other upstream 1641313 15258311 ~ 15260331 (+)
G676919 NA other upstream 1794160 15105603 ~ 15107143 (+)
G681909 NA other downstream 2261969 19163936 ~ 19165640 (+)
G682611 NA other downstream 2826866 19728833 ~ 19729671 (+)
G683669 NA other downstream 3660908 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 3724983 20626950 ~ 20632899 (+)
G683845 NA other downstream 3805091 20707058 ~ 20707371 (+)

Expression


Co-expression Network