G679364


Basic Information

Item Value
gene id G679364
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 16902253 ~ 16910145 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU773823
ctgaaatgtggcaaaaggtcgcaaagttaaagggggccgaatactttcgcaaggcactgtacctattgttcacctaataccttttctgcactattggttagagcctgtaagcaagcatttcactgtaaagtctacaacCGTTGTATTCGGCACAAGTGAAAAATAAACTTGATTTGATGGACTGTCACTTCTATtggattatttgagctgttcttgccataatatggacttggtcttcacACAAATAGGGCTggctaccttctgtataccaccaggACCATGTCACAACACACCGGATTGGCTCAAATTGCATTAAGaaggtaaaaataaagaaaaaaccgttgaataagtaggtgtgtccaatttttttactggtactgtttgtcatgtacagttgaagtcggaagtttacatacaccttagccaaaaacatttaaactgaGTTTTTCACAAATTCCtagcatttaatcctagtaaacattccccg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU773823 True 487 lncRNA 0.39 2 16902253 16910145

Neighbor

gene id symbol gene type direction distance location
LOC110529504 mdn1 coding downstream 9233 16830751 ~ 16893020 (-)
LOC110529503 lyrm2 coding downstream 71624 16825797 ~ 16830629 (-)
LOC110529501 LOC106571293 coding downstream 144136 16721162 ~ 16758117 (-)
LOC110529499 LOC106571292 coding downstream 181562 16685761 ~ 16720691 (-)
LOC110529498 LOC106571289 coding downstream 228109 16639846 ~ 16674144 (-)
LOC110529508 LOC106571332 coding upstream 15752 16925897 ~ 17037936 (-)
LOC110529509 LOC106571331 coding upstream 145970 17056115 ~ 17081579 (-)
LOC110529510 LOC106571329 coding upstream 512621 17422766 ~ 17498984 (-)
LOC110529512 LOC106571327 coding upstream 796464 17706609 ~ 17720195 (-)
LOC110529513 LOC106571326 coding upstream 810822 17720967 ~ 17723873 (-)
G679332 NA non-coding downstream 81124 16818931 ~ 16821129 (-)
LOC118965497 NA non-coding downstream 433952 16467419 ~ 16505761 (-)
G679107 NA non-coding downstream 439201 16462828 ~ 16463052 (-)
G679105 NA non-coding downstream 440099 16461922 ~ 16462154 (-)
G679407 NA non-coding upstream 143831 17053976 ~ 17100186 (-)
G679463 NA non-coding upstream 190286 17100431 ~ 17101124 (-)
G679485 NA non-coding upstream 218886 17129031 ~ 17129256 (-)
G679623 NA non-coding upstream 291109 17201254 ~ 17251247 (-)
G679210 LOC106571290 other downstream 271994 16625090 ~ 16630259 (-)
G679087 NA other downstream 469239 16432621 ~ 16433014 (-)
G676635 LOC106571254 other downstream 2385725 14508329 ~ 14516528 (-)
G676178 NA other downstream 2613908 14287849 ~ 14288345 (-)
G676077 NA other downstream 2694628 14206987 ~ 14207625 (-)
G679471 NA other upstream 203398 17113543 ~ 17114528 (-)
G681659 NA other upstream 1881085 18791230 ~ 18792137 (-)
G684844 NA other upstream 4568621 21478766 ~ 21479203 (-)
LOC110529207 sprtn other upstream 5010282 21920427 ~ 21926307 (-)
G685953 NA other upstream 5248885 22159030 ~ 22161042 (-)

Expression


Co-expression Network