XLOC_026056



Basic Information


Item Value
gene id XLOC_026056
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 6525698 ~ 6529154 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00052430
TGACAATGCACAGAAGCTGCAGTCTTGATGAACAGACTGTGTAAAACGACCATAGTCAGTCTGATGAAAACTTTCATCACAAGtatCATAACCTCCTGATCAGAGGAGTCTTTGGTTCCAGTATGGAAACCCCAACACATTCTGGGAAAAATCAAGGCAGGACAGCTGTTTCATCTAACCGTCCAATGGACACAAAGGACTGGAATAAAGAGCATGTGAGAGAATGGCTACTTGAGATAAATGTGAACAGAGAAGAGGCAGAATTGTTGTATAGTCAGGGAGTTAATGGAGCTGATCTTCTTCATTTGGAGAAGACCTATCTTATAGTGCAACAAATGAAATCAGATGCAGTAGAAATGATTATTCAGCACATTAATCTTTTGAACCCAAAGACTCAACAGCTGAACAAAACGGTGAGGTGGCCAAGCATGAAGCCCTA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00052430 True 439 lncRNA 0.41 3 6525698 6529154

Neighbor


gene id symbol gene type direction distance location
XLOC_026055 gga3b coding downstream 5938 6490520 ~ 6519760 (-)
XLOC_026054 sumo2b coding downstream 84079 6423274 ~ 6441619 (-)
XLOC_026053 jpt1b coding downstream 108370 6380160 ~ 6417328 (-)
XLOC_026052 NA coding downstream 148760 6308693 ~ 6376938 (-)
XLOC_026051 BX004785.2 coding downstream 244195 6278752 ~ 6281503 (-)
XLOC_026057 si:ch1073-209h18.1 coding upstream 24208 6553362 ~ 6555154 (-)
XLOC_026058 FP016106.1 coding upstream 27806 6556960 ~ 6597195 (-)
XLOC_026059 si:ch73-59f11.3 coding upstream 71140 6600294 ~ 6608342 (-)
XLOC_026060 atg4db coding upstream 163215 6692369 ~ 6719232 (-)
XLOC_026061 mast1b coding upstream 191704 6720858 ~ 6768905 (-)
XLOC_026050 NA non-coding downstream 285633 6237098 ~ 6240065 (-)
XLOC_026049 NA non-coding downstream 297552 6220081 ~ 6228146 (-)
XLOC_026048 NA non-coding downstream 313738 6203736 ~ 6211960 (-)
XLOC_026046 NA non-coding downstream 429877 6073491 ~ 6095821 (-)
XLOC_026064 NA non-coding upstream 521365 7050519 ~ 7077819 (-)
XLOC_026065 NA non-coding upstream 554353 7083507 ~ 7121370 (-)
XLOC_026077 NA non-coding upstream 815956 7345110 ~ 7346494 (-)
XLOC_026081 NA non-coding upstream 948649 7477803 ~ 7537078 (-)

Expression



Co-expression Network