Gene
RNA
| Item | Value |
|---|---|
| gene id | G679485 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 17129031 ~ 17129256 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU773958 | True | 226 | lncRNA | 0.50 | 1 | 17129031 | 17129256 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529509 | LOC106571331 | coding | downstream | 47452 | 17056115 ~ 17081579 (-) |
| LOC110529508 | LOC106571332 | coding | downstream | 91095 | 16925897 ~ 17037936 (-) |
| LOC110529504 | mdn1 | coding | downstream | 236011 | 16830751 ~ 16893020 (-) |
| LOC110529503 | lyrm2 | coding | downstream | 298402 | 16825797 ~ 16830629 (-) |
| LOC110529501 | LOC106571293 | coding | downstream | 370914 | 16721162 ~ 16758117 (-) |
| LOC110529510 | LOC106571329 | coding | upstream | 293510 | 17422766 ~ 17498984 (-) |
| LOC110529512 | LOC106571327 | coding | upstream | 577353 | 17706609 ~ 17720195 (-) |
| LOC110529513 | LOC106571326 | coding | upstream | 591711 | 17720967 ~ 17723873 (-) |
| LOC110529514 | LOC106571323 | coding | upstream | 599034 | 17728290 ~ 17756041 (-) |
| LOC110529517 | nt5d1 | coding | upstream | 626997 | 17756253 ~ 17835551 (-) |
| G679463 | NA | non-coding | downstream | 27907 | 17100431 ~ 17101124 (-) |
| G679407 | NA | non-coding | downstream | 28845 | 17053976 ~ 17100186 (-) |
| G679364 | NA | non-coding | downstream | 218886 | 16902253 ~ 16910145 (-) |
| G679623 | NA | non-coding | upstream | 71998 | 17201254 ~ 17251247 (-) |
| G679642 | NA | non-coding | upstream | 93525 | 17222781 ~ 17227113 (-) |
| G679679 | NA | non-coding | upstream | 149888 | 17279144 ~ 17279354 (-) |
| G679681 | NA | non-coding | upstream | 150457 | 17279713 ~ 17279943 (-) |
| G679703 | NA | non-coding | upstream | 173332 | 17302588 ~ 17302936 (-) |
| G679471 | NA | other | downstream | 14503 | 17113543 ~ 17114528 (-) |
| G679210 | LOC106571290 | other | downstream | 498772 | 16625090 ~ 16630259 (-) |
| G679087 | NA | other | downstream | 696017 | 16432621 ~ 16433014 (-) |
| G676635 | LOC106571254 | other | downstream | 2612503 | 14508329 ~ 14516528 (-) |
| G676178 | NA | other | downstream | 2840686 | 14287849 ~ 14288345 (-) |
| G681659 | NA | other | upstream | 1661974 | 18791230 ~ 18792137 (-) |
| G684844 | NA | other | upstream | 4349510 | 21478766 ~ 21479203 (-) |
| LOC110529207 | sprtn | other | upstream | 4791171 | 21920427 ~ 21926307 (-) |
| G685953 | NA | other | upstream | 5029774 | 22159030 ~ 22161042 (-) |
| LOC110529643 | LOC106571435 | other | upstream | 6487651 | 23614938 ~ 23659111 (-) |
