G679497


Basic Information

Item Value
gene id G679497
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 17201225 ~ 17251687 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU773974
aaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaaagccatttcttaaagatatccataaaaagtgttgtttaaagtttgccacaagccacctaggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttgacaacaacaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaatggaatggttcaaaaataaaacatatccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatccaacctcactgagctcgagctgtgttgcaaggaggaatgggaaaaaatttcagtctctcgatgtgcaaaactgatagagacataccccaagcgacttacagctgtaatcgcagcaaaaggtggcgctacaaagtattaacttaagggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttaatgat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU773974 True 839 lncRNA 0.41 2 17201225 17251687

Neighbor

gene id symbol gene type direction distance location
LOC110529507 LOC106571333 coding upstream 275537 16921776 ~ 16925688 (+)
LOC110529505 LOC106571335 coding upstream 279528 16893102 ~ 16921697 (+)
LOC110529502 LOC106571295 coding upstream 375209 16793718 ~ 16826016 (+)
LOC110529497 LOC106571290 coding upstream 570957 16624843 ~ 16630268 (+)
LOC118965606 NA coding upstream 768972 16428557 ~ 16432253 (+)
LOC110529193 NA coding downstream 428518 17680205 ~ 17681988 (+)
LOC110529511 LOC106571328 coding downstream 430377 17682064 ~ 17701475 (+)
LOC110529515 LOC106571324 coding downstream 573749 17825436 ~ 17833210 (+)
LOC110529518 LOC106571322 coding downstream 594031 17845718 ~ 17857814 (+)
LOC110529519 LOC106571321 coding downstream 707464 17959151 ~ 18057345 (+)
G678918 NA non-coding upstream 88579 17112328 ~ 17112646 (+)
G678915 NA non-coding upstream 94775 17106149 ~ 17106450 (+)
G678833 NA non-coding upstream 209636 16991106 ~ 16991589 (+)
G678746 NA non-coding upstream 299258 16901303 ~ 16901967 (+)
G678616 NA non-coding upstream 489640 16682141 ~ 16711585 (+)
G679572 NA non-coding downstream 10330 17262017 ~ 17265145 (+)
G679685 NA non-coding downstream 33761 17285448 ~ 17285698 (+)
G679710 NA non-coding downstream 56027 17307714 ~ 17308015 (+)
G679717 NA non-coding downstream 60159 17311846 ~ 17312124 (+)
G679718 NA non-coding downstream 60653 17312340 ~ 17312623 (+)
LOC110529493 LOC106571284 other upstream 812889 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 815280 16384802 ~ 16385945 (+)
LOC110529464 LOC106571299 other upstream 1941235 15258311 ~ 15260331 (+)
G676919 NA other upstream 2094082 15105603 ~ 15107143 (+)
G681909 NA other downstream 1912249 19163936 ~ 19165640 (+)
G682611 NA other downstream 2477146 19728833 ~ 19729671 (+)
G683669 NA other downstream 3311188 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 3375263 20626950 ~ 20632899 (+)
G683845 NA other downstream 3455371 20707058 ~ 20707371 (+)

Expression


Co-expression Network