G679717


Basic Information

Item Value
gene id G679717
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 17311846 ~ 17312124 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU774200
tgcttccattcagccacaagagcattagtgaggtgggGCAcatttgggcgattaggcctggctcgcagtcagtgttccaattcatctcaaaggtgttcgatggggttgaggtcagggctctgtgcaggccagtcaagttcttccacattgaTCTTGACAAACGATTTCTGTATGCAtttcgctttgtgcatgggggcactgtcattctgaaacaggtaagggcctttcccaaactgttaccacaaagttggaaccacagaatcgtctagaatatcattg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU774200 True 279 lncRNA 0.48 1 17311846 17312124

Neighbor

gene id symbol gene type direction distance location
LOC110529507 LOC106571333 coding upstream 386158 16921776 ~ 16925688 (+)
LOC110529505 LOC106571335 coding upstream 390149 16893102 ~ 16921697 (+)
LOC110529502 LOC106571295 coding upstream 485830 16793718 ~ 16826016 (+)
LOC110529497 LOC106571290 coding upstream 681578 16624843 ~ 16630268 (+)
LOC118965606 NA coding upstream 879593 16428557 ~ 16432253 (+)
LOC110529193 NA coding downstream 368081 17680205 ~ 17681988 (+)
LOC110529511 LOC106571328 coding downstream 369940 17682064 ~ 17701475 (+)
LOC110529515 LOC106571324 coding downstream 513312 17825436 ~ 17833210 (+)
LOC110529518 LOC106571322 coding downstream 533594 17845718 ~ 17857814 (+)
LOC110529519 LOC106571321 coding downstream 647027 17959151 ~ 18057345 (+)
G679710 NA non-coding upstream 3831 17307714 ~ 17308015 (+)
G679685 NA non-coding upstream 26148 17285448 ~ 17285698 (+)
G679572 NA non-coding upstream 46701 17262017 ~ 17265145 (+)
G679497 NA non-coding upstream 60159 17201225 ~ 17251687 (+)
G678918 NA non-coding upstream 199200 17112328 ~ 17112646 (+)
G679718 NA non-coding downstream 216 17312340 ~ 17312623 (+)
G679788 NA non-coding downstream 49932 17362056 ~ 17362318 (+)
G679826 NA non-coding downstream 94254 17406378 ~ 17406793 (+)
G679834 NA non-coding downstream 106647 17418771 ~ 17419251 (+)
G679836 NA non-coding downstream 110769 17422893 ~ 17426681 (+)
LOC110529493 LOC106571284 other upstream 923510 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 925901 16384802 ~ 16385945 (+)
LOC110529464 LOC106571299 other upstream 2051856 15258311 ~ 15260331 (+)
G676919 NA other upstream 2204703 15105603 ~ 15107143 (+)
G681909 NA other downstream 1851812 19163936 ~ 19165640 (+)
G682611 NA other downstream 2416709 19728833 ~ 19729671 (+)
G683669 NA other downstream 3250751 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 3314826 20626950 ~ 20632899 (+)
G683845 NA other downstream 3394934 20707058 ~ 20707371 (+)

Expression


Co-expression Network