G680072


Basic Information

Item Value
gene id G680072
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 17551415 ~ 17551642 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU774566
GCCTGACCTATCAGCAGTTGATTCTCCACAAAACAGAGGGGATAGTACATGTTATTCTGTCTAACAAATGTTGAACAACTGAGATGCAAAATGTTACAATTCAACAATTCTGTGATTGATCCAAAAAGCAATGAATCGCTTGGCTTGTTGATCTTTGCTAGACTGTTGAGAGAACTTTGTCATCTGTTATATTTCTCACAGAAAATATTTTTGACACTGGGTGAGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU774566 True 228 lncRNA 0.37 1 17551415 17551642

Neighbor

gene id symbol gene type direction distance location
LOC110529507 LOC106571333 coding upstream 625727 16921776 ~ 16925688 (+)
LOC110529505 LOC106571335 coding upstream 629718 16893102 ~ 16921697 (+)
LOC110529502 LOC106571295 coding upstream 725399 16793718 ~ 16826016 (+)
LOC110529497 LOC106571290 coding upstream 921147 16624843 ~ 16630268 (+)
LOC118965606 NA coding upstream 1119162 16428557 ~ 16432253 (+)
LOC110529193 NA coding downstream 128563 17680205 ~ 17681988 (+)
LOC110529511 LOC106571328 coding downstream 130422 17682064 ~ 17701475 (+)
LOC110529515 LOC106571324 coding downstream 273794 17825436 ~ 17833210 (+)
LOC110529518 LOC106571322 coding downstream 294076 17845718 ~ 17857814 (+)
LOC110529519 LOC106571321 coding downstream 407509 17959151 ~ 18057345 (+)
G680054 NA non-coding upstream 13228 17537813 ~ 17538187 (+)
G680044 NA non-coding upstream 22414 17528674 ~ 17529001 (+)
G679836 NA non-coding upstream 124734 17422893 ~ 17426681 (+)
G679834 NA non-coding upstream 132164 17418771 ~ 17419251 (+)
G679826 NA non-coding upstream 144622 17406378 ~ 17406793 (+)
G680124 NA non-coding downstream 34604 17586246 ~ 17586516 (+)
G680156 NA non-coding downstream 61462 17613104 ~ 17640119 (+)
G680157 NA non-coding downstream 61892 17613534 ~ 17640249 (+)
G680197 NA non-coding downstream 109541 17661183 ~ 17661487 (+)
G680218 NA non-coding downstream 161504 17713146 ~ 17718004 (+)
LOC110529493 LOC106571284 other upstream 1163079 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 1165470 16384802 ~ 16385945 (+)
LOC110529464 LOC106571299 other upstream 2291425 15258311 ~ 15260331 (+)
G676919 NA other upstream 2444272 15105603 ~ 15107143 (+)
G681909 NA other downstream 1612294 19163936 ~ 19165640 (+)
G682611 NA other downstream 2177191 19728833 ~ 19729671 (+)
G683669 NA other downstream 3011233 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 3075308 20626950 ~ 20632899 (+)
G683845 NA other downstream 3155416 20707058 ~ 20707371 (+)

Expression


Co-expression Network