G680157


Basic Information

Item Value
gene id G680157
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 17613534 ~ 17640249 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU774652
GAAATATAATACAATtagccgccattttggagtcaacataaaccagaaattacatgataaatattcccttacctttgatgatcttcatcagaatgcactcccaggaatcccagttccacaataaatgcttgatttgttcgataatatctgttatttatgtccaattagctacttttgttagcgcgttaggTATACAAATCCAAAAGCTTGTGCAGGTCGAGCATtactt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU774652 True 229 lncRNA 0.35 2 17613534 17640249

Neighbor

gene id symbol gene type direction distance location
LOC110529507 LOC106571333 coding upstream 687846 16921776 ~ 16925688 (+)
LOC110529505 LOC106571335 coding upstream 691837 16893102 ~ 16921697 (+)
LOC110529502 LOC106571295 coding upstream 787518 16793718 ~ 16826016 (+)
LOC110529497 LOC106571290 coding upstream 983266 16624843 ~ 16630268 (+)
LOC118965606 NA coding upstream 1181281 16428557 ~ 16432253 (+)
LOC110529193 NA coding downstream 39956 17680205 ~ 17681988 (+)
LOC110529511 LOC106571328 coding downstream 41815 17682064 ~ 17701475 (+)
LOC110529515 LOC106571324 coding downstream 185187 17825436 ~ 17833210 (+)
LOC110529518 LOC106571322 coding downstream 205469 17845718 ~ 17857814 (+)
LOC110529519 LOC106571321 coding downstream 318902 17959151 ~ 18057345 (+)
G680124 NA non-coding upstream 27018 17586246 ~ 17586516 (+)
G680072 NA non-coding upstream 61892 17551415 ~ 17551642 (+)
G680054 NA non-coding upstream 75347 17537813 ~ 17538187 (+)
G680044 NA non-coding upstream 84533 17528674 ~ 17529001 (+)
G679836 NA non-coding upstream 186853 17422893 ~ 17426681 (+)
G680197 NA non-coding downstream 20934 17661183 ~ 17661487 (+)
G680218 NA non-coding downstream 72897 17713146 ~ 17718004 (+)
G680174 NA non-coding downstream 79444 17719693 ~ 17720175 (+)
G680223 NA non-coding downstream 84982 17725231 ~ 17727416 (+)
G680224 LOC106571323 non-coding downstream 90756 17731005 ~ 17731344 (+)
LOC110529493 LOC106571284 other upstream 1225198 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 1227589 16384802 ~ 16385945 (+)
LOC110529464 LOC106571299 other upstream 2353544 15258311 ~ 15260331 (+)
G676919 NA other upstream 2506391 15105603 ~ 15107143 (+)
G681909 NA other downstream 1523687 19163936 ~ 19165640 (+)
G682611 NA other downstream 2088584 19728833 ~ 19729671 (+)
G683669 NA other downstream 2922626 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 2986701 20626950 ~ 20632899 (+)
G683845 NA other downstream 3066809 20707058 ~ 20707371 (+)

Expression


Co-expression Network