G680197


Basic Information

Item Value
gene id G680197
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 17661183 ~ 17661487 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU774699
tctcagaacaagaatagactgacgagtttcagaagaaaggtatttgtttctggccattatgagcctgtaatcaaacccacaaatgctgatgctccagatactcaactagtttaaagaaggccagttttattgcttcttttaatcaagacaacagttttcagctgtgctaacataattgcaaaagggttttctaatgatcaattagccttttagaatgataaacttggattagctaacacaacgtgccattggaacacaggagtgatggttgctgataatgggcctctgtacgcctatgtagatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU774699 True 305 lncRNA 0.38 1 17661183 17661487

Neighbor

gene id symbol gene type direction distance location
LOC110529507 LOC106571333 coding upstream 735495 16921776 ~ 16925688 (+)
LOC110529505 LOC106571335 coding upstream 739486 16893102 ~ 16921697 (+)
LOC110529502 LOC106571295 coding upstream 835167 16793718 ~ 16826016 (+)
LOC110529497 LOC106571290 coding upstream 1030915 16624843 ~ 16630268 (+)
LOC118965606 NA coding upstream 1228930 16428557 ~ 16432253 (+)
LOC110529193 NA coding downstream 18718 17680205 ~ 17681988 (+)
LOC110529511 LOC106571328 coding downstream 20577 17682064 ~ 17701475 (+)
LOC110529515 LOC106571324 coding downstream 163949 17825436 ~ 17833210 (+)
LOC110529518 LOC106571322 coding downstream 184231 17845718 ~ 17857814 (+)
LOC110529519 LOC106571321 coding downstream 297664 17959151 ~ 18057345 (+)
G680157 NA non-coding upstream 20934 17613534 ~ 17640249 (+)
G680156 NA non-coding upstream 21064 17613104 ~ 17640119 (+)
G680124 NA non-coding upstream 74667 17586246 ~ 17586516 (+)
G680072 NA non-coding upstream 109541 17551415 ~ 17551642 (+)
G680054 NA non-coding upstream 122996 17537813 ~ 17538187 (+)
G680218 NA non-coding downstream 51659 17713146 ~ 17718004 (+)
G680174 NA non-coding downstream 58206 17719693 ~ 17720175 (+)
G680223 NA non-coding downstream 63744 17725231 ~ 17727416 (+)
G680224 LOC106571323 non-coding downstream 69518 17731005 ~ 17731344 (+)
G680231 NA non-coding downstream 78354 17739841 ~ 17740092 (+)
LOC110529493 LOC106571284 other upstream 1272847 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 1275238 16384802 ~ 16385945 (+)
LOC110529464 LOC106571299 other upstream 2401193 15258311 ~ 15260331 (+)
G676919 NA other upstream 2554040 15105603 ~ 15107143 (+)
G681909 NA other downstream 1502449 19163936 ~ 19165640 (+)
G682611 NA other downstream 2067346 19728833 ~ 19729671 (+)
G683669 NA other downstream 2901388 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 2965463 20626950 ~ 20632899 (+)
G683845 NA other downstream 3045571 20707058 ~ 20707371 (+)

Expression


Co-expression Network