Gene
RNA
| Item | Value |
|---|---|
| gene id | G680573 |
| gene name | LOC106571328 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 17698793 ~ 17699180 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: E3 UFM1-protein ligase 1-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU775085 | True | 279 | lncRNA | 0.50 | 2 | 17698793 | 17699180 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529510 | LOC106571329 | coding | downstream | 199809 | 17422766 ~ 17498984 (-) |
| LOC110529509 | LOC106571331 | coding | downstream | 617214 | 17056115 ~ 17081579 (-) |
| LOC110529508 | LOC106571332 | coding | downstream | 660857 | 16925897 ~ 17037936 (-) |
| LOC110529504 | mdn1 | coding | downstream | 805773 | 16830751 ~ 16893020 (-) |
| LOC110529503 | lyrm2 | coding | downstream | 868164 | 16825797 ~ 16830629 (-) |
| LOC110529512 | LOC106571327 | coding | upstream | 7429 | 17706609 ~ 17720195 (-) |
| LOC110529513 | LOC106571326 | coding | upstream | 21787 | 17720967 ~ 17723873 (-) |
| LOC110529514 | LOC106571323 | coding | upstream | 29110 | 17728290 ~ 17756041 (-) |
| LOC110529517 | nt5d1 | coding | upstream | 57073 | 17756253 ~ 17835551 (-) |
| LOC110529520 | marcs | coding | upstream | 369972 | 18069152 ~ 18072594 (-) |
| G680123 | NA | non-coding | downstream | 113292 | 17585210 ~ 17585501 (-) |
| G680121 | NA | non-coding | downstream | 114439 | 17584050 ~ 17584354 (-) |
| G680046 | NA | non-coding | downstream | 168854 | 17529690 ~ 17529939 (-) |
| G680015 | NA | non-coding | downstream | 189359 | 17509166 ~ 17509434 (-) |
| G679703 | NA | non-coding | downstream | 395857 | 17302588 ~ 17302936 (-) |
| G680571 | NA | non-coding | upstream | 2634 | 17701814 ~ 17702255 (-) |
| G680572 | NA | non-coding | upstream | 3835 | 17703015 ~ 17703245 (-) |
| G680581 | NA | non-coding | upstream | 11364 | 17710544 ~ 17715714 (-) |
| G680582 | NA | non-coding | upstream | 13553 | 17712733 ~ 17717551 (-) |
| G680586 | NA | non-coding | upstream | 32403 | 17731583 ~ 17731795 (-) |
| G679471 | NA | other | downstream | 584265 | 17113543 ~ 17114528 (-) |
| G679210 | LOC106571290 | other | downstream | 1068534 | 16625090 ~ 16630259 (-) |
| G679087 | NA | other | downstream | 1265779 | 16432621 ~ 16433014 (-) |
| G676635 | LOC106571254 | other | downstream | 3182265 | 14508329 ~ 14516528 (-) |
| G676178 | NA | other | downstream | 3410448 | 14287849 ~ 14288345 (-) |
| G681659 | NA | other | upstream | 1092050 | 18791230 ~ 18792137 (-) |
| G684844 | NA | other | upstream | 3779586 | 21478766 ~ 21479203 (-) |
| LOC110529207 | sprtn | other | upstream | 4221247 | 21920427 ~ 21926307 (-) |
| G685953 | NA | other | upstream | 4459850 | 22159030 ~ 22161042 (-) |
| LOC110529643 | LOC106571435 | other | upstream | 5917727 | 23614938 ~ 23659111 (-) |
