G680218


Basic Information

Item Value
gene id G680218
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 17713146 ~ 17718004 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU774721
cttcaaagtagccaccctttgccttgatgacagctttgcacacttgtggCTTtttctcagccagcttcatgaggaatactttccaacagtcttgaaggagttcccacatatgctgagcacttgttaactgtttttccttcactctgcagtccaactcatctcaaactatcaattgggttgaggtcaggtgattgtggaggccaggtcatctgatgcagcactccatcactctccttcttggtcaaatagtgcTTACACCGTATGGAGGtgtattttgggtcattgtcctgttgaaaaacaaatgatag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU774721 True 308 lncRNA 0.44 2 17713146 17718004

Neighbor

gene id symbol gene type direction distance location
LOC110529511 LOC106571328 coding upstream 11671 17682064 ~ 17701475 (+)
LOC110529193 NA coding upstream 31158 17680205 ~ 17681988 (+)
LOC110529507 LOC106571333 coding upstream 787458 16921776 ~ 16925688 (+)
LOC110529505 LOC106571335 coding upstream 791449 16893102 ~ 16921697 (+)
LOC110529502 LOC106571295 coding upstream 887130 16793718 ~ 16826016 (+)
LOC110529515 LOC106571324 coding downstream 107432 17825436 ~ 17833210 (+)
LOC110529518 LOC106571322 coding downstream 127714 17845718 ~ 17857814 (+)
LOC110529519 LOC106571321 coding downstream 241147 17959151 ~ 18057345 (+)
LOC110531073 NA coding downstream 444701 18162705 ~ 18164856 (+)
LOC110529521 LOC106571319 coding downstream 556363 18274367 ~ 18311064 (+)
G680197 NA non-coding upstream 51659 17661183 ~ 17661487 (+)
G680157 NA non-coding upstream 72897 17613534 ~ 17640249 (+)
G680156 NA non-coding upstream 73027 17613104 ~ 17640119 (+)
G680124 NA non-coding upstream 126630 17586246 ~ 17586516 (+)
G680072 NA non-coding upstream 161504 17551415 ~ 17551642 (+)
G680174 NA non-coding downstream 1689 17719693 ~ 17720175 (+)
G680223 NA non-coding downstream 7227 17725231 ~ 17727416 (+)
G680224 LOC106571323 non-coding downstream 13001 17731005 ~ 17731344 (+)
G680231 NA non-coding downstream 21837 17739841 ~ 17740092 (+)
G680202 LOC106571323 non-coding downstream 23089 17741093 ~ 17741321 (+)
LOC110529493 LOC106571284 other upstream 1324810 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 1327201 16384802 ~ 16385945 (+)
LOC110529464 LOC106571299 other upstream 2453156 15258311 ~ 15260331 (+)
G676919 NA other upstream 2606003 15105603 ~ 15107143 (+)
G681909 NA other downstream 1445932 19163936 ~ 19165640 (+)
G682611 NA other downstream 2010829 19728833 ~ 19729671 (+)
G683669 NA other downstream 2844871 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 2908946 20626950 ~ 20632899 (+)
G683845 NA other downstream 2989054 20707058 ~ 20707371 (+)

Expression


Co-expression Network