G680919


Basic Information

Item Value
gene id G680919
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 18198381 ~ 18198972 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU775444
gtcagttaagaacgaattgttatttacaatgacggcctaggaacagtgggttaactgccttgttcaggggtagaatgacagatttttaccttgtcagcttggggatttgatctagcaacctttcagttacaggccaaacactctaaccacttaaCTATCTGCCGTCGtaatagggcattgggccacAACGAGCCAGAACAACTTCAGAGAACCTTGGCATAGATTATACAAGTGCCTGTAGCTCTAttggatgtgacaccattctttcACAAGAAGTTCAAACATCTGATGTTTTGTTcgtggtggtggaaaacactgtttcaggcaccactccagaatctcccataagtgatcaattgggttgagatcggatGACTGAGACCAGCTTGCATCGTTTGCATGCTCATTAAACCCTTACGACCACTCATGCCCTGTGGATGCGGGCATTGTCATCCCATGGGGACATAGCACCTGGTAACCAAacaatggcctgcccagcatttttttttacatgacctTGTtatgcatgatgggatgttaattagttaattaactcaggaaccacacctgtgtggaagaactGTATtttaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU775444 True 592 lncRNA 0.44 1 18198381 18198972

Neighbor

gene id symbol gene type direction distance location
LOC110531073 NA coding upstream 33525 18162705 ~ 18164856 (+)
LOC110529519 LOC106571321 coding upstream 142653 17959151 ~ 18057345 (+)
LOC110529518 LOC106571322 coding upstream 340567 17845718 ~ 17857814 (+)
LOC110529515 LOC106571324 coding upstream 365171 17825436 ~ 17833210 (+)
LOC110529511 LOC106571328 coding upstream 496906 17682064 ~ 17701475 (+)
LOC110529521 LOC106571319 coding downstream 75395 18274367 ~ 18311064 (+)
LOC118965599 LOC106571319 coding downstream 111935 18310907 ~ 18317600 (+)
LOC110529194 NA coding downstream 132575 18331547 ~ 18342108 (+)
LOC110529523 LOC106571317 coding downstream 163816 18362788 ~ 18449484 (+)
LOC110529195 LOC106571338 coding downstream 256006 18454978 ~ 18456213 (+)
G680899 NA non-coding upstream 14310 18183848 ~ 18184071 (+)
G680871 NA non-coding upstream 37235 18160945 ~ 18161146 (+)
G680869 NA non-coding upstream 37496 18160261 ~ 18160885 (+)
G680502 NA non-coding upstream 51887 18146185 ~ 18146494 (+)
G680920 NA non-coding downstream 559 18199531 ~ 18199819 (+)
G680959 NA non-coding downstream 110178 18309150 ~ 18309952 (+)
G680956 NA non-coding downstream 119191 18318163 ~ 18318943 (+)
G680957 NA non-coding downstream 120075 18319047 ~ 18319349 (+)
LOC110529505 LOC106571335 other upstream 1303546 16893102 ~ 16921697 (+)
LOC110529493 LOC106571284 other upstream 1810045 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 1812436 16384802 ~ 16385945 (+)
LOC110529464 LOC106571299 other upstream 2938391 15258311 ~ 15260331 (+)
G676919 NA other upstream 3091238 15105603 ~ 15107143 (+)
G681909 NA other downstream 964964 19163936 ~ 19165640 (+)
G682611 NA other downstream 1529861 19728833 ~ 19729671 (+)
G683669 NA other downstream 2363903 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 2427978 20626950 ~ 20632899 (+)
G683845 NA other downstream 2508086 20707058 ~ 20707371 (+)

Expression


Co-expression Network