G681180


Basic Information

Item Value
gene id G681180
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 18498683 ~ 18498883 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU775736
agccacttatcTCCAGGAAAatcatcagggacagactgatattctgccaaatgtacagggattggactgctgaggactggagtaaagtaattttctctgatgaatccactttccgattgtttggggcatctgtgaaaaagcttgtccggagaagacaaggtgagggctaccatcagtcctgtgtcacgtcaacagtaaagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU775736 True 201 lncRNA 0.46 1 18498683 18498883

Neighbor

gene id symbol gene type direction distance location
LOC110529525 NA coding upstream 33940 18461630 ~ 18464743 (+)
LOC118965607 NA coding upstream 39388 18457768 ~ 18459295 (+)
LOC110529195 LOC106571338 coding upstream 42470 18454978 ~ 18456213 (+)
LOC110529523 LOC106571317 coding upstream 49199 18362788 ~ 18449484 (+)
LOC110529194 NA coding upstream 156575 18331547 ~ 18342108 (+)
LOC110529529 cdk19 coding downstream 217176 18716059 ~ 18786106 (+)
trnaa-ugc-23 NA coding downstream 238127 18737010 ~ 18737083 (+)
LOC110529530 LOC106571309 coding downstream 307634 18806517 ~ 18876551 (+)
LOC110529536 LOC106571306 coding downstream 403352 18902235 ~ 18906394 (+)
LOC110529539 LOC106571303 coding downstream 426115 18924998 ~ 18936498 (+)
G681177 NA non-coding upstream 4247 18494228 ~ 18494436 (+)
G681175 NA non-coding upstream 15617 18482598 ~ 18483066 (+)
G681174 NA non-coding upstream 16973 18481485 ~ 18481710 (+)
G681171 NA non-coding upstream 20392 18477286 ~ 18478291 (+)
G681167 NA non-coding upstream 24687 18473769 ~ 18473996 (+)
G681181 NA non-coding downstream 1085 18499968 ~ 18500175 (+)
G681182 NA non-coding downstream 1613 18500496 ~ 18500722 (+)
G681183 NA non-coding downstream 5221 18504104 ~ 18504340 (+)
G681184 NA non-coding downstream 6003 18504886 ~ 18505112 (+)
G681190 NA non-coding downstream 18660 18517543 ~ 18517763 (+)
LOC110529505 LOC106571335 other upstream 1603848 16893102 ~ 16921697 (+)
LOC110529493 LOC106571284 other upstream 2110347 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 2112738 16384802 ~ 16385945 (+)
LOC110529464 LOC106571299 other upstream 3238693 15258311 ~ 15260331 (+)
G676919 NA other upstream 3391540 15105603 ~ 15107143 (+)
G681909 NA other downstream 665053 19163936 ~ 19165640 (+)
G682611 NA other downstream 1229950 19728833 ~ 19729671 (+)
G683669 NA other downstream 2063992 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 2128067 20626950 ~ 20632899 (+)
G683845 NA other downstream 2208175 20707058 ~ 20707371 (+)

Expression


Co-expression Network