G681190


Basic Information

Item Value
gene id G681190
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 18517543 ~ 18517763 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU775746
gttgtatgcctttccaaatcgtgtcgtatcaattgaatttaccacaggtggactccaatctagttgtagaaacatctcaaggatgatcaatggaaacaggatgtacctgagctcaatttcgagtctgaaTTCTTGTGTAAATAAGCttttctgttttcactttgtcattatgggtgtgtgtagattgaggaggataAATattaattaaatcaattttagaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU775746 True 221 lncRNA 0.35 1 18517543 18517763

Neighbor

gene id symbol gene type direction distance location
LOC110529525 NA coding upstream 52800 18461630 ~ 18464743 (+)
LOC118965607 NA coding upstream 58248 18457768 ~ 18459295 (+)
LOC110529195 LOC106571338 coding upstream 61330 18454978 ~ 18456213 (+)
LOC110529523 LOC106571317 coding upstream 68059 18362788 ~ 18449484 (+)
LOC110529194 NA coding upstream 175435 18331547 ~ 18342108 (+)
LOC110529529 cdk19 coding downstream 198296 18716059 ~ 18786106 (+)
trnaa-ugc-23 NA coding downstream 219247 18737010 ~ 18737083 (+)
LOC110529530 LOC106571309 coding downstream 288754 18806517 ~ 18876551 (+)
LOC110529536 LOC106571306 coding downstream 384472 18902235 ~ 18906394 (+)
LOC110529539 LOC106571303 coding downstream 407235 18924998 ~ 18936498 (+)
G681184 NA non-coding upstream 12431 18504886 ~ 18505112 (+)
G681183 NA non-coding upstream 13203 18504104 ~ 18504340 (+)
G681182 NA non-coding upstream 16821 18500496 ~ 18500722 (+)
G681181 NA non-coding upstream 17368 18499968 ~ 18500175 (+)
G681180 NA non-coding upstream 18660 18498683 ~ 18498883 (+)
G681192 NA non-coding downstream 1240 18519003 ~ 18519341 (+)
G681201 NA non-coding downstream 15401 18533164 ~ 18533390 (+)
G681222 NA non-coding downstream 70514 18588277 ~ 18588487 (+)
G681156 NA non-coding downstream 71072 18588835 ~ 18589137 (+)
G681162 LOC106571314 non-coding downstream 75852 18593615 ~ 18593832 (+)
LOC110529505 LOC106571335 other upstream 1622708 16893102 ~ 16921697 (+)
LOC110529493 LOC106571284 other upstream 2129207 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 2131598 16384802 ~ 16385945 (+)
LOC110529464 LOC106571299 other upstream 3257553 15258311 ~ 15260331 (+)
G676919 NA other upstream 3410400 15105603 ~ 15107143 (+)
G681909 NA other downstream 646173 19163936 ~ 19165640 (+)
G682611 NA other downstream 1211070 19728833 ~ 19729671 (+)
G683669 NA other downstream 2045112 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 2109187 20626950 ~ 20632899 (+)
G683845 NA other downstream 2189295 20707058 ~ 20707371 (+)

Expression


Co-expression Network