G681659


Basic Information

Item Value
gene id G681659
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 18791230 ~ 18792137 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU776244
tactctctgtttatcatatatgtatagtcactttaaccatacctacgtgaacatactacctcaattaacccgactaaccggtgcctgtatatagcctctccactgttatttttcactgtctttttactgttgtttttatttctttacttaactattgttcacctaatacctattttttactttaaaatcgcactgttggttagggcctgtaagtaagcatttcactgttgtattcggcatacgtgacaaataaactttgatttgatttgtagtggtaggccacacaagctcacagaaaaggaccgctgagtgctgaagcacatagcaCGTAAAGATagcctgtccttggttgcaacactcactaccgagttccaaactgcctctagaaacAACGTcaccacaataactgttcatcgggagcatcatgaaatgggttttcatggccgagcagccgcacacgcctaagatcaccatgtgcaatgccaagcgtcagctggagtggtgtaaagctcactgccattggactttggagcagtggaaacgtgttctctggagtgatgaatcacgcttcaccaactGGGAGTCAGACGGACAAAActgggtttggctgatgccaggagaacgctacctgccccaatgcatagggccaactgtaaagtttggtggaggaggaataatggtctggggatgtttttcatggtttgggctaggccccttagttccagtgaagggaaatcttaacgttacagcatacaatgacattctagacgattctgtgcttccaacctcAACCACATCAAAGACcttagggatgaattggaacaccgactgcgagccaggtctaatcgcccaacatcagtgcccgatctcactaatggtcttgtggctgaatggaagaaggtccccgc

Function

NR:

description
Transposable element Tcb1 transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU776244 True 908 TUCP 0.45 1 18791230 18792137

Neighbor

gene id symbol gene type direction distance location
LOC110529528 LOC106571312 coding downstream 76410 18690451 ~ 18714820 (-)
LOC110529527 LOC106571313 coding downstream 103565 18676608 ~ 18687665 (-)
LOC110529198 LOC106571314 coding downstream 117034 18588818 ~ 18674196 (-)
LOC110529526 LOC106571316 coding downstream 203236 18582163 ~ 18587994 (-)
LOC110529520 marcs coding downstream 718636 18069152 ~ 18072594 (-)
LOC110529532 LOC106571305 coding upstream 84597 18876734 ~ 18883562 (-)
LOC110529199 ppil4 coding upstream 96959 18889096 ~ 18895190 (-)
LOC110529535 katna1 coding upstream 114151 18904660 ~ 18913467 (-)
LOC110529533 LOC106571304 coding upstream 121573 18913710 ~ 18922072 (-)
LOC110529538 LOC106571302 coding upstream 130096 18922233 ~ 18924820 (-)
G681658 NA non-coding downstream 2190 18788065 ~ 18789040 (-)
G681586 NA non-coding downstream 161432 18626724 ~ 18629798 (-)
G681562 NA non-coding downstream 198324 18592597 ~ 18592906 (-)
G681525 LOC106607739 non-coding downstream 248582 18542190 ~ 18542648 (-)
G681657 NA non-coding upstream 3437 18795574 ~ 18796382 (-)
G681672 NA non-coding upstream 7090 18799227 ~ 18799495 (-)
G681674 NA non-coding upstream 9626 18801763 ~ 18801963 (-)
G681675 NA non-coding upstream 12830 18804967 ~ 18805260 (-)
G681676 NA non-coding upstream 13323 18805460 ~ 18805663 (-)
G679471 NA other downstream 1676702 17113543 ~ 17114528 (-)
G679210 LOC106571290 other downstream 2160971 16625090 ~ 16630259 (-)
G679087 NA other downstream 2358216 16432621 ~ 16433014 (-)
G676635 LOC106571254 other downstream 4274702 14508329 ~ 14516528 (-)
G676178 NA other downstream 4502885 14287849 ~ 14288345 (-)
G684844 NA other upstream 2686629 21478766 ~ 21479203 (-)
LOC110529207 sprtn other upstream 3128290 21920427 ~ 21926307 (-)
G685953 NA other upstream 3366893 22159030 ~ 22161042 (-)
LOC110529643 LOC106571435 other upstream 4824770 23614938 ~ 23659111 (-)
G687890 NA other upstream 4843172 23635309 ~ 23637408 (-)

Expression


Co-expression Network