G681335


Basic Information

Item Value
gene id G681335
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 18801394 ~ 18801743 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU775896
gtgtttcagggagcgtttgacagtgatgagtggaggtcgtttgaccgctgacccattacggatgcaggcaatgaggcagtgatcgctgagatcttggttgaaaacagcagaggtgtatttagaggggaagttggctaggatgatatctatgagggtgcccgtgtttacggctttggggtggtacctggtaggttcattgatcatttgtgtgagattgagggcatcaagcttagattgtaggatggctggggtgttaagcatgttccagtttaggtcgcctagcagcacgagctctgaagatagatggggggcaatcagttcacatatggtgtccagagcacagctggggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU775896 True 350 lncRNA 0.51 1 18801394 18801743

Neighbor

gene id symbol gene type direction distance location
LOC110529529 cdk19 coding upstream 15288 18716059 ~ 18786106 (+)
trnaa-ugc-23 NA coding upstream 64311 18737010 ~ 18737083 (+)
LOC110529197 LOC106571315 coding upstream 219344 18469380 ~ 18582050 (+)
LOC110529525 NA coding upstream 336651 18461630 ~ 18464743 (+)
LOC118965607 NA coding upstream 342099 18457768 ~ 18459295 (+)
LOC110529530 LOC106571309 coding downstream 4774 18806517 ~ 18876551 (+)
LOC110529536 LOC106571306 coding downstream 100492 18902235 ~ 18906394 (+)
LOC110529539 LOC106571303 coding downstream 123255 18924998 ~ 18936498 (+)
LOC118965498 lrp11 coding downstream 141416 18943159 ~ 18948106 (+)
LOC110529547 LOC106571352 coding downstream 355519 19157262 ~ 19161639 (+)
G681283 NA non-coding upstream 4797 18794882 ~ 18796597 (+)
G681297 NA non-coding upstream 7381 18792365 ~ 18794013 (+)
G681294 NA non-coding upstream 9250 18791112 ~ 18792144 (+)
G681295 NA non-coding upstream 10489 18789470 ~ 18790905 (+)
G681288 NA non-coding upstream 12722 18786841 ~ 18788672 (+)
G681336 NA non-coding downstream 2114 18803857 ~ 18804086 (+)
G681359 NA non-coding downstream 86895 18888638 ~ 18888906 (+)
G681369 NA non-coding downstream 110748 18912491 ~ 18912967 (+)
G681788 NA non-coding downstream 211083 19012826 ~ 19013045 (+)
G681790 NA non-coding downstream 212429 19014172 ~ 19014412 (+)
LOC110529505 LOC106571335 other upstream 1906559 16893102 ~ 16921697 (+)
LOC110529493 LOC106571284 other upstream 2413058 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 2415449 16384802 ~ 16385945 (+)
LOC110529464 LOC106571299 other upstream 3541404 15258311 ~ 15260331 (+)
G676919 NA other upstream 3694251 15105603 ~ 15107143 (+)
G681909 NA other downstream 362193 19163936 ~ 19165640 (+)
G682611 NA other downstream 927090 19728833 ~ 19729671 (+)
G683669 NA other downstream 1761132 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 1825207 20626950 ~ 20632899 (+)
G683845 NA other downstream 1905315 20707058 ~ 20707371 (+)

Expression


Co-expression Network