G681336


Basic Information

Item Value
gene id G681336
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 18803857 ~ 18804086 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU775897
AATTACAACATGCCATGTAAAGGCAtagggacgaagaccaaacaaacatgtaatacaaaacaaaagagacaggagtacctcgaataaatacattggggcgagacccgtaatcatctgcacaatacaAGTGGCACGAAAGTCAAgacaacacagcacaggtactcacacgaccaatggacattgtaacaataatcgacagcccaaTGGTGAACCAAAGGGCACATTTATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU775897 True 230 lncRNA 0.42 1 18803857 18804086

Neighbor

gene id symbol gene type direction distance location
LOC110529529 cdk19 coding upstream 17751 18716059 ~ 18786106 (+)
trnaa-ugc-23 NA coding upstream 66774 18737010 ~ 18737083 (+)
LOC110529197 LOC106571315 coding upstream 221807 18469380 ~ 18582050 (+)
LOC110529525 NA coding upstream 339114 18461630 ~ 18464743 (+)
LOC118965607 NA coding upstream 344562 18457768 ~ 18459295 (+)
LOC110529530 LOC106571309 coding downstream 2431 18806517 ~ 18876551 (+)
LOC110529536 LOC106571306 coding downstream 98149 18902235 ~ 18906394 (+)
LOC110529539 LOC106571303 coding downstream 120912 18924998 ~ 18936498 (+)
LOC118965498 lrp11 coding downstream 139073 18943159 ~ 18948106 (+)
LOC110529547 LOC106571352 coding downstream 353176 19157262 ~ 19161639 (+)
G681335 NA non-coding upstream 2114 18801394 ~ 18801743 (+)
G681283 NA non-coding upstream 7260 18794882 ~ 18796597 (+)
G681297 NA non-coding upstream 9844 18792365 ~ 18794013 (+)
G681294 NA non-coding upstream 11713 18791112 ~ 18792144 (+)
G681295 NA non-coding upstream 12952 18789470 ~ 18790905 (+)
G681359 NA non-coding downstream 84552 18888638 ~ 18888906 (+)
G681369 NA non-coding downstream 108405 18912491 ~ 18912967 (+)
G681788 NA non-coding downstream 208740 19012826 ~ 19013045 (+)
G681790 NA non-coding downstream 210086 19014172 ~ 19014412 (+)
G681800 NA non-coding downstream 219590 19023676 ~ 19023881 (+)
LOC110529505 LOC106571335 other upstream 1909022 16893102 ~ 16921697 (+)
LOC110529493 LOC106571284 other upstream 2415521 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 2417912 16384802 ~ 16385945 (+)
LOC110529464 LOC106571299 other upstream 3543867 15258311 ~ 15260331 (+)
G676919 NA other upstream 3696714 15105603 ~ 15107143 (+)
G681909 NA other downstream 359850 19163936 ~ 19165640 (+)
G682611 NA other downstream 924747 19728833 ~ 19729671 (+)
G683669 NA other downstream 1758789 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 1822864 20626950 ~ 20632899 (+)
G683845 NA other downstream 1902972 20707058 ~ 20707371 (+)

Expression


Co-expression Network