G681704


Basic Information

Item Value
gene id G681704
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 18836446 ~ 18838361 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU776293
AAAATGCTGAGTTCACCTAGCAGCCACTTGGAAGTGGAAATGCTGTTGCATTCCATCAATGAATATGATAAATGGGTTAAACCTGCAGTTATCTTGATACAAGTGGTAATTGGGTTCTGGGCAGGGTAATCTATAACATTGTATAAACTACAATCTTGATCCCTATGATAAATAAACCCGGTCAAGAAAACAATACTATATCAGAGCATAATTATGTTAAGATTTATTATGACAAGACATTGTTGGAAAAATAGAAAGCGGTTTGAACCATGTATTTTTGTCCTCTCTTTACTCAGCCCATTGGGTGATTGTAGATGTGGAGGTCAGGGGTTCACCCTACAGCTGGGTGTGACTAGATCTTTACTCAGCCCATTGGGTGATTGTAGATGTGGAGGTCAGGGGTTCACCCTACAGCTGGGTGTGACTAGATCTTTACTCAGCCCATTGGGAGATTGTAGATGTGAAGGTCAGGGGTTCACCCTGCAGCTGGGCGTGACTAGATCGGTCTACAGGCACAGTTTATGcaataaataaaatcaaataaatgtgTATCGGTCATGTACGTATATATAGCAATAGTTATAGCCTGGCCTGTGGCTTTAATCTCACTGCTCAACTCAGCCAGGCTGATAAACAAAGAGTCCCAGTTTGGTTCAGGTAAAATGGAGACAACCTAGATGAGGCTCTACTTCATGACTTTAGGCTTGTATAGCTTACCCTCTTACAGGCCTTGTGGTCAATAATCCACTGATTAACATGCTGGACATTCCTTGAGGCTTAGGCCTAGATAAAACCAATAGGAAAATAACAATATAAAAAACACAGGAAAAGGCCTGTTAAATGAAGCAGGCATCTACCAAACACTACCACAATAATAGAGGATTCAACTCATTCAGCCAAACCCTGTCTTTTAGTTTTTATCAGACACTTCTTGGCCTACAAGTGATGAATCTTTTCAAACTCCATGTCAACACAGGCAAACAGATGACAAATCAACTATGGATAATTACAGAAAGAGCACCCAAGAGAGCTGTTGTATCTACCCAGTAAAAAttgtaaatgtatatacagtgttccCGAGTAAATAAATAAACTCAAGTGAATGTACAAATGCACAGTCAACAGGACACATCTGGTCTACGTTAGTGGAATTACTGACAGAAAAATGAAATGAACATTTAACACTACCAGCGTAATTTCCAAGCATCTCTGCCAGAGAGGTTGTAAATAAGGCATTGCTCGGCATAATCGGGTGGTTTAGACTCTGCATGAGTAACATGGCTGTGGCAAGAGGTGAGAATGTTCTGCATTACTTCTGAATTAAAGAGAACACAGTACATATTGGATTTACATGCCCACCAATCAAATCAAGGCACAATTACTACTGCTCTGACTGGTGTGAGCAATTTTCATGGGATACTTTTTCAGCCAACAACCATAgctatacactaccaggttaaaGATTCCAAGAAATGAAAAAACACCTACAAAATATAATATTAATCACAGTGCCATCAAAGGAATAAAGTACAAATGTGGACATAGTATTAATAATTGAATGCACTGATCACCAGTAAAAACTACAGCATCCAGCGTACCACTTAACAACCAGCCTTGCCAAATTTAAtacatatatacactgaacaaaaatataaacacatgtaaagtgttggtcccatgtttcatgagctgaaataaaatatctcagaaatgttccatacgcccAAAAGGTTATTTCTCTCCAGTtttgggcacaaatttgtttacatccctgtcctttttaaatcgttgaaattgttgcatgttgcatttatatttttaggaaagtattcagacaactttac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU776293 True 1844 lncRNA 0.38 2 18836446 18838361

Neighbor

gene id symbol gene type direction distance location
LOC110529528 LOC106571312 coding downstream 121626 18690451 ~ 18714820 (-)
LOC110529527 LOC106571313 coding downstream 148781 18676608 ~ 18687665 (-)
LOC110529198 LOC106571314 coding downstream 162250 18588818 ~ 18674196 (-)
LOC110529526 LOC106571316 coding downstream 248452 18582163 ~ 18587994 (-)
LOC110529520 marcs coding downstream 763852 18069152 ~ 18072594 (-)
LOC110529532 LOC106571305 coding upstream 38373 18876734 ~ 18883562 (-)
LOC110529199 ppil4 coding upstream 50735 18889096 ~ 18895190 (-)
LOC110529535 katna1 coding upstream 67927 18904660 ~ 18913467 (-)
LOC110529533 LOC106571304 coding upstream 75349 18913710 ~ 18922072 (-)
LOC110529538 LOC106571302 coding upstream 83872 18922233 ~ 18924820 (-)
G681676 NA non-coding downstream 30783 18805460 ~ 18805663 (-)
G681675 NA non-coding downstream 31186 18804967 ~ 18805260 (-)
G681674 NA non-coding downstream 34483 18801763 ~ 18801963 (-)
G681672 NA non-coding downstream 36951 18799227 ~ 18799495 (-)
G681657 NA non-coding downstream 40064 18795574 ~ 18796382 (-)
G681737 NA non-coding upstream 35708 18874069 ~ 18876496 (-)
G681744 NA non-coding upstream 50334 18888695 ~ 18888976 (-)
G681748 NA non-coding upstream 55805 18894166 ~ 18970925 (-)
G681735 LOC106571306 non-coding upstream 65220 18903581 ~ 18904548 (-)
G681659 NA other downstream 44309 18791230 ~ 18792137 (-)
G679471 NA other downstream 1721918 17113543 ~ 17114528 (-)
G679210 LOC106571290 other downstream 2206187 16625090 ~ 16630259 (-)
G679087 NA other downstream 2403432 16432621 ~ 16433014 (-)
G676635 LOC106571254 other downstream 4319918 14508329 ~ 14516528 (-)
G684844 NA other upstream 2640405 21478766 ~ 21479203 (-)
LOC110529207 sprtn other upstream 3082066 21920427 ~ 21926307 (-)
G685953 NA other upstream 3320669 22159030 ~ 22161042 (-)
LOC110529643 LOC106571435 other upstream 4778546 23614938 ~ 23659111 (-)
G687890 NA other upstream 4796948 23635309 ~ 23637408 (-)

Expression


Co-expression Network