G681735 (LOC106571306)


Basic Information

Item Value
gene id G681735
gene name LOC106571306
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 18903581 ~ 18904548 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU776329
AAGAGAGAGATTCTTTGAGTGGTGCCTCTGTCTGCATCTGATCAGACAGCCCTCCCAAGTCATCACCCTCATTGTTATCATACAGCAGGTCTGGGTCCATGCGGAGGGGAGTCTCCGGGAGCTTGCCTGGGGCAGCAGTCTCCTCCTGGGTGGTGTCCGCATGCTTCAGAGGGATTTGTTGGATCTGTGATGACCACATCATTTTCCCTTGGGATCCTGAAAATCTCGCTGTGTCCAATGGGATAGGTGTTGGTATACTGCGCAAGCGTCTGGAAATTGGGGCTCATCAGTATCTTCACTTCACACATTTCTGGCTGCTGGACCTTTTTCCCCTCCATCTCGATGACCTCGCTGAACACTTGGAGAGCCACCACCTCTTCTGAATCACTCCACAAGCGATTCTGGCTCACCATCACCCGGGTGACAGTGGAGACATAGTCACCAGATTCAAATTCACTTGTGCCATTGGTGGTATCCAACAGCAAGGCTTGGCAGTTCAACCTGGTCACCCCTGACAACTCCACAGGGATGTCATTGATGAGCACCTGCTCTTCATCCACTGAAAT

Function

NR:

description
PREDICTED: glycoprotein integral membrane protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU776329 True 566 lncRNA 0.52 4 18903581 18904548

Neighbor

gene id symbol gene type direction distance location
LOC110529199 ppil4 coding downstream 8391 18889096 ~ 18895190 (-)
LOC110529532 LOC106571305 coding downstream 20019 18876734 ~ 18883562 (-)
LOC110529528 LOC106571312 coding downstream 188761 18690451 ~ 18714820 (-)
LOC110529527 LOC106571313 coding downstream 215916 18676608 ~ 18687665 (-)
LOC110529198 LOC106571314 coding downstream 229385 18588818 ~ 18674196 (-)
LOC110529535 katna1 coding upstream 1740 18904660 ~ 18913467 (-)
LOC110529533 LOC106571304 coding upstream 9162 18913710 ~ 18922072 (-)
LOC110529538 LOC106571302 coding upstream 17685 18922233 ~ 18924820 (-)
LOC110529537 lrp11 coding upstream 31008 18934732 ~ 18947785 (-)
LOC110529540 map3k5 coding upstream 43729 18948277 ~ 19007324 (-)
G681744 NA non-coding downstream 14605 18888695 ~ 18888976 (-)
G681737 NA non-coding downstream 27085 18874069 ~ 18876496 (-)
G681704 NA non-coding downstream 65220 18836446 ~ 18838361 (-)
G681676 NA non-coding downstream 97918 18805460 ~ 18805663 (-)
G681675 NA non-coding downstream 98321 18804967 ~ 18805260 (-)
G681777 NA non-coding upstream 103023 19007571 ~ 19007783 (-)
G681780 NA non-coding upstream 104146 19008694 ~ 19008957 (-)
G681796 NA non-coding upstream 116864 19021412 ~ 19021922 (-)
G681659 NA other downstream 111444 18791230 ~ 18792137 (-)
G679471 NA other downstream 1789053 17113543 ~ 17114528 (-)
G679210 LOC106571290 other downstream 2273322 16625090 ~ 16630259 (-)
G679087 NA other downstream 2470567 16432621 ~ 16433014 (-)
G676635 LOC106571254 other downstream 4387053 14508329 ~ 14516528 (-)
G684844 NA other upstream 2574218 21478766 ~ 21479203 (-)
LOC110529207 sprtn other upstream 3015879 21920427 ~ 21926307 (-)
G685953 NA other upstream 3254482 22159030 ~ 22161042 (-)
LOC110529643 LOC106571435 other upstream 4712359 23614938 ~ 23659111 (-)
G687890 NA other upstream 4730761 23635309 ~ 23637408 (-)

Expression


Co-expression Network