G681369


Basic Information

Item Value
gene id G681369
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 18912491 ~ 18912967 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU775931
CTTCTACTTGTACAGGCCATTTGTCACGAATGCCATCTTTATTACTTGGTGGTTTGGTTGGGGTGGTCTCCAGTTTAAAATTTTCTAGAGTTGTCATTATTTCTTCAACCTGTTTGTTTTCTTCGTTTATCTCTTGCCATACCGATAGCAAACAATAGCATAACTGTAGTTCCCAAGTAAGGCGTACTCTCGAGCAAGTTTCACGTTTTCACTTATCTCATGCAGACTCATTCTAGATGATGAAGAACATTAGTTGTTAGTACAGTTCTCTCCAGAAGGGATGACAACAGAATC

Function

NR:

description
katanin p60 ATPase-containing subunit A1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU775931 True 294 lncRNA 0.39 2 18912491 18912967

Neighbor

gene id symbol gene type direction distance location
LOC110529536 LOC106571306 coding upstream 6097 18902235 ~ 18906394 (+)
LOC110529530 LOC106571309 coding upstream 35940 18806517 ~ 18876551 (+)
LOC110529529 cdk19 coding upstream 126385 18716059 ~ 18786106 (+)
trnaa-ugc-23 NA coding upstream 175408 18737010 ~ 18737083 (+)
LOC110529197 LOC106571315 coding upstream 330441 18469380 ~ 18582050 (+)
LOC110529539 LOC106571303 coding downstream 12031 18924998 ~ 18936498 (+)
LOC118965498 lrp11 coding downstream 30192 18943159 ~ 18948106 (+)
LOC110529547 LOC106571352 coding downstream 244295 19157262 ~ 19161639 (+)
LOC110529202 lama2 coding downstream 461806 19374773 ~ 19537068 (+)
LOC110529203 NA coding downstream 621953 19534920 ~ 19539445 (+)
G681359 NA non-coding upstream 23585 18888638 ~ 18888906 (+)
G681336 NA non-coding upstream 108405 18803857 ~ 18804086 (+)
G681335 NA non-coding upstream 110748 18801394 ~ 18801743 (+)
G681283 NA non-coding upstream 115894 18794882 ~ 18796597 (+)
G681297 NA non-coding upstream 118478 18792365 ~ 18794013 (+)
G681788 NA non-coding downstream 99859 19012826 ~ 19013045 (+)
G681790 NA non-coding downstream 101205 19014172 ~ 19014412 (+)
G681800 NA non-coding downstream 110709 19023676 ~ 19023881 (+)
G681851 LOC106571351 non-coding downstream 171549 19084516 ~ 19086756 (+)
G681863 NA non-coding downstream 182166 19095133 ~ 19095367 (+)
LOC110529505 LOC106571335 other upstream 2017656 16893102 ~ 16921697 (+)
LOC110529493 LOC106571284 other upstream 2524155 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 2526546 16384802 ~ 16385945 (+)
LOC110529464 LOC106571299 other upstream 3652501 15258311 ~ 15260331 (+)
G676919 NA other upstream 3805348 15105603 ~ 15107143 (+)
G681909 NA other downstream 250969 19163936 ~ 19165640 (+)
G682611 NA other downstream 815866 19728833 ~ 19729671 (+)
G683669 NA other downstream 1649908 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 1713983 20626950 ~ 20632899 (+)
G683845 NA other downstream 1794091 20707058 ~ 20707371 (+)

Expression


Co-expression Network