G681788


Basic Information

Item Value
gene id G681788
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 19012826 ~ 19013045 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU776386
gtgcaacaggtcagcacctcaggagtaaatgtcagttggtttttcataggttgagacagcaggtgcaatagagagagagggacgggggtcgaaaacagcaggtctgggacaaggtagcacatccggtgaacagttCAGGGTGCCATAGCCACATGCAAAACAGCAGAAACTGTATCAgtagcatggccaggtggactgggggactggggacagccaggag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU776386 True 220 lncRNA 0.54 1 19012826 19013045

Neighbor

gene id symbol gene type direction distance location
LOC118965498 lrp11 coding upstream 64720 18943159 ~ 18948106 (+)
LOC110529539 LOC106571303 coding upstream 76328 18924998 ~ 18936498 (+)
LOC110529536 LOC106571306 coding upstream 106432 18902235 ~ 18906394 (+)
LOC110529530 LOC106571309 coding upstream 136275 18806517 ~ 18876551 (+)
LOC110529529 cdk19 coding upstream 226720 18716059 ~ 18786106 (+)
LOC110529547 LOC106571352 coding downstream 144217 19157262 ~ 19161639 (+)
LOC110529202 lama2 coding downstream 361728 19374773 ~ 19537068 (+)
LOC110529203 NA coding downstream 521875 19534920 ~ 19539445 (+)
LOC110529551 LOC106607757 coding downstream 527573 19540618 ~ 19543748 (+)
LOC110529552 LOC106571356 coding downstream 579539 19592584 ~ 19632071 (+)
G681369 NA non-coding upstream 99859 18912491 ~ 18912967 (+)
G681359 NA non-coding upstream 123920 18888638 ~ 18888906 (+)
G681336 NA non-coding upstream 208740 18803857 ~ 18804086 (+)
G681335 NA non-coding upstream 211083 18801394 ~ 18801743 (+)
G681283 NA non-coding upstream 216229 18794882 ~ 18796597 (+)
G681790 NA non-coding downstream 1127 19014172 ~ 19014412 (+)
G681800 NA non-coding downstream 10631 19023676 ~ 19023881 (+)
G681851 LOC106571351 non-coding downstream 71471 19084516 ~ 19086756 (+)
G681863 NA non-coding downstream 82088 19095133 ~ 19095367 (+)
G681868 NA non-coding downstream 87736 19100781 ~ 19101032 (+)
LOC110529505 LOC106571335 other upstream 2117991 16893102 ~ 16921697 (+)
LOC110529493 LOC106571284 other upstream 2624490 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 2626881 16384802 ~ 16385945 (+)
LOC110529464 LOC106571299 other upstream 3752836 15258311 ~ 15260331 (+)
G676919 NA other upstream 3905683 15105603 ~ 15107143 (+)
G681909 NA other downstream 150891 19163936 ~ 19165640 (+)
G682611 NA other downstream 715788 19728833 ~ 19729671 (+)
G683669 NA other downstream 1549830 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 1613905 20626950 ~ 20632899 (+)
G683845 NA other downstream 1694013 20707058 ~ 20707371 (+)

Expression


Co-expression Network