G681790


Basic Information

Item Value
gene id G681790
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 19014172 ~ 19014412 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU776388
CAGtattagcactaactgaagtttatttagtgcttcatCCAGGTAGcaggagagtagagcattgcggtagtctaatctagaagtgtcaaaagcatggattagcttttctgccaaatgttttgagaaaaATAAATCTGATTTTTGCAAATTTACGAAGATGTAAATGATGAATCTTTTGACCAACCGGATCAGCTCTTTTTCCAATAATtgtgcaaaagatcagaattggtctgcTTGAGAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU776388 True 241 lncRNA 0.36 1 19014172 19014412

Neighbor

gene id symbol gene type direction distance location
LOC118965498 lrp11 coding upstream 66066 18943159 ~ 18948106 (+)
LOC110529539 LOC106571303 coding upstream 77674 18924998 ~ 18936498 (+)
LOC110529536 LOC106571306 coding upstream 107778 18902235 ~ 18906394 (+)
LOC110529530 LOC106571309 coding upstream 137621 18806517 ~ 18876551 (+)
trnaa-ugc-23 NA coding upstream 277089 18737010 ~ 18737083 (+)
LOC110529547 LOC106571352 coding downstream 142850 19157262 ~ 19161639 (+)
LOC110529202 lama2 coding downstream 360361 19374773 ~ 19537068 (+)
LOC110529203 NA coding downstream 520508 19534920 ~ 19539445 (+)
LOC110529551 LOC106607757 coding downstream 526206 19540618 ~ 19543748 (+)
LOC110529552 LOC106571356 coding downstream 578172 19592584 ~ 19632071 (+)
G681788 NA non-coding upstream 1127 19012826 ~ 19013045 (+)
G681369 NA non-coding upstream 101205 18912491 ~ 18912967 (+)
G681359 NA non-coding upstream 125266 18888638 ~ 18888906 (+)
G681336 NA non-coding upstream 210086 18803857 ~ 18804086 (+)
G681335 NA non-coding upstream 212429 18801394 ~ 18801743 (+)
G681800 NA non-coding downstream 9264 19023676 ~ 19023881 (+)
G681851 LOC106571351 non-coding downstream 70104 19084516 ~ 19086756 (+)
G681863 NA non-coding downstream 80721 19095133 ~ 19095367 (+)
G681868 NA non-coding downstream 86369 19100781 ~ 19101032 (+)
G681874 NA non-coding downstream 96048 19110460 ~ 19110679 (+)
LOC110529505 LOC106571335 other upstream 2119337 16893102 ~ 16921697 (+)
LOC110529493 LOC106571284 other upstream 2625836 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 2628227 16384802 ~ 16385945 (+)
LOC110529464 LOC106571299 other upstream 3754182 15258311 ~ 15260331 (+)
G676919 NA other upstream 3907029 15105603 ~ 15107143 (+)
G681909 NA other downstream 149524 19163936 ~ 19165640 (+)
G682611 NA other downstream 714421 19728833 ~ 19729671 (+)
G683669 NA other downstream 1548463 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 1612538 20626950 ~ 20632899 (+)
G683845 NA other downstream 1692646 20707058 ~ 20707371 (+)

Expression


Co-expression Network