G681800


Basic Information

Item Value
gene id G681800
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 19023676 ~ 19023881 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU776398
GTACAGATGGAAAGACTATAGCCTGTATGTCTAATATTCCAACACCCAGCTTACTCTGTACACAGAGCTCTGTTGGGATGATTGAGTCATCAGCACTATAATACTGATTAAGGGTAATGAGCAAGTTATGAACATGAGTTAAATATTACAAGTTCAAGTGTACAGTGGGCTAACCTTAGTGAAAAATATGATTGAGTATAGAACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU776398 True 206 lncRNA 0.37 1 19023676 19023881

Neighbor

gene id symbol gene type direction distance location
LOC118965498 lrp11 coding upstream 75570 18943159 ~ 18948106 (+)
LOC110529539 LOC106571303 coding upstream 87178 18924998 ~ 18936498 (+)
LOC110529536 LOC106571306 coding upstream 117282 18902235 ~ 18906394 (+)
LOC110529530 LOC106571309 coding upstream 147125 18806517 ~ 18876551 (+)
trnaa-ugc-23 NA coding upstream 286593 18737010 ~ 18737083 (+)
LOC110529547 LOC106571352 coding downstream 133381 19157262 ~ 19161639 (+)
LOC110529202 lama2 coding downstream 350892 19374773 ~ 19537068 (+)
LOC110529203 NA coding downstream 511039 19534920 ~ 19539445 (+)
LOC110529551 LOC106607757 coding downstream 516737 19540618 ~ 19543748 (+)
LOC110529552 LOC106571356 coding downstream 568703 19592584 ~ 19632071 (+)
G681790 NA non-coding upstream 9264 19014172 ~ 19014412 (+)
G681788 NA non-coding upstream 10631 19012826 ~ 19013045 (+)
G681369 NA non-coding upstream 110709 18912491 ~ 18912967 (+)
G681359 NA non-coding upstream 134770 18888638 ~ 18888906 (+)
G681336 NA non-coding upstream 219590 18803857 ~ 18804086 (+)
G681851 LOC106571351 non-coding downstream 60635 19084516 ~ 19086756 (+)
G681863 NA non-coding downstream 71252 19095133 ~ 19095367 (+)
G681868 NA non-coding downstream 76900 19100781 ~ 19101032 (+)
G681874 NA non-coding downstream 86579 19110460 ~ 19110679 (+)
G681875 NA non-coding downstream 87535 19111416 ~ 19112214 (+)
LOC110529505 LOC106571335 other upstream 2128841 16893102 ~ 16921697 (+)
LOC110529493 LOC106571284 other upstream 2635340 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 2637731 16384802 ~ 16385945 (+)
LOC110529464 LOC106571299 other upstream 3763686 15258311 ~ 15260331 (+)
G676919 NA other upstream 3916533 15105603 ~ 15107143 (+)
G681909 NA other downstream 140055 19163936 ~ 19165640 (+)
G682611 NA other downstream 704952 19728833 ~ 19729671 (+)
G683669 NA other downstream 1538994 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 1603069 20626950 ~ 20632899 (+)
G683845 NA other downstream 1683177 20707058 ~ 20707371 (+)

Expression


Co-expression Network