G681877


Basic Information

Item Value
gene id G681877
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 19114395 ~ 19114650 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU776478
GATAGTTCTTAATGACTTTCACTGTAAGTTtggggttgttgtcatgctgcaTAATAAATTTGGGGCTAATCAGATGCCTCCCTGATGGTATTGCATGATGGATAAGTATCTGCCTGTAATTCTCAGCATTGAGGAGACCATTAATTCTGACCAAATCCCAAACTCCATTTGCAGAAATGCAGCCCCAAACTTGCAAggaacctccaccatgcttcactgttgcctGCAAACACTCATCCAGCCCTTCAGCGAACAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU776478 True 256 lncRNA 0.44 1 19114395 19114650

Neighbor

gene id symbol gene type direction distance location
LOC118965498 lrp11 coding upstream 166289 18943159 ~ 18948106 (+)
LOC110529539 LOC106571303 coding upstream 177897 18924998 ~ 18936498 (+)
LOC110529536 LOC106571306 coding upstream 208001 18902235 ~ 18906394 (+)
LOC110529530 LOC106571309 coding upstream 237844 18806517 ~ 18876551 (+)
trnaa-ugc-23 NA coding upstream 377312 18737010 ~ 18737083 (+)
LOC110529547 LOC106571352 coding downstream 42612 19157262 ~ 19161639 (+)
LOC110529202 lama2 coding downstream 260123 19374773 ~ 19537068 (+)
LOC110529203 NA coding downstream 420270 19534920 ~ 19539445 (+)
LOC110529551 LOC106607757 coding downstream 425968 19540618 ~ 19543748 (+)
LOC110529552 LOC106571356 coding downstream 477934 19592584 ~ 19632071 (+)
G681875 NA non-coding upstream 2181 19111416 ~ 19112214 (+)
G681874 NA non-coding upstream 3716 19110460 ~ 19110679 (+)
G681868 NA non-coding upstream 13363 19100781 ~ 19101032 (+)
G681863 NA non-coding upstream 19028 19095133 ~ 19095367 (+)
G681851 LOC106571351 non-coding upstream 27639 19084516 ~ 19086756 (+)
G681897 NA non-coding downstream 34239 19148889 ~ 19149208 (+)
G681898 NA non-coding downstream 35069 19149719 ~ 19150057 (+)
G681902 NA non-coding downstream 52446 19167096 ~ 19169880 (+)
G682270 NA non-coding downstream 307470 19422120 ~ 19422393 (+)
G682332 NA non-coding downstream 377723 19492373 ~ 19492579 (+)
LOC110529505 LOC106571335 other upstream 2219560 16893102 ~ 16921697 (+)
LOC110529493 LOC106571284 other upstream 2726059 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 2728450 16384802 ~ 16385945 (+)
LOC110529464 LOC106571299 other upstream 3854405 15258311 ~ 15260331 (+)
G676919 NA other upstream 4007252 15105603 ~ 15107143 (+)
G681909 NA other downstream 49286 19163936 ~ 19165640 (+)
G682611 NA other downstream 614183 19728833 ~ 19729671 (+)
G683669 NA other downstream 1448225 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 1512300 20626950 ~ 20632899 (+)
G683845 NA other downstream 1592408 20707058 ~ 20707371 (+)

Expression


Co-expression Network