G681902


Basic Information

Item Value
gene id G681902
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 19167096 ~ 19169880 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU776506
TGAtctcctcctccagctgcagCCCTGTGGCCCCAGCCAGGAGGTCCTCCATCACTGAGAGGTCCCTCATAGACACCTTGACGTTGAAGGGCAGGGAGAACCTGTGGCAGACCTCTGAGAGCATGTACTGCTTCTTGTCGTGGACCACCTCCACAAAGCCGCCATCCAGACACATGGGGATCAGCACGGCCTTGTACTTCTTCCCCACCATCTTCTCACAGGCCAGGGCCTCCACCGTCTTTCTCCTGCCACCATAGATCACCTCGCTGGTCTCCCTTTTGTGGACCAGGTACTGGTCTCCCACCAGTACCGAGGACAGCCCCTCGTAGTCGGCCTCAAAGGCCCTGGTAGCCACCACGTGGAGCTGCTCCATGTCACTCTTGGCTACCTCTAGGTCATATGCTGTGGGGAACATCCGGGGCCTGCGCTTGAACCTTCCGTTGTAAGACACTGGAATGAGGAAGCGTCTTTGGGCCTCACTGCGGATCTCAGACGCTAGGATCCTCTTGGTCTGGTAGGCACTGTGGACAATGACTTGCTTAGAGGACGTCAGGAAACCCAATTCCTCCTGAACTTGTGATGGTGGCTCTATGATCTCAGCCCTGAAGGGGAAGACCTCGCTCGGCTTGGCAAAGACATCACGGAGTGACAGAGGCTGCATGAAACAGGCACCGTCACTCTCCTCGGTTACGTCCAACACCTCAACGTCAAGGGTAGATGGGATGAAAACAACGTTCTTCCCAAACTTGGACACAGTCTGGAGCTCATAGACAGGTGTGAGAACCAGATCTCCGCTGTAGTCCTCTGGCAACTTAGACACACACTTCTCCTTTGATGGCAAAGACTTGGCCCAAGTCACTGTCCTTTTCCTTCCTTTGGGCATTTTCCATTCCACCAGCTCCCTGAGGGTGTAGAACTGGTCGTCGGCACACTCATAGAACTCCCCAGTGTGCGAGAGCTTCACAGTGAAGATGTGCTTGGAGTCTTTCCGCGTGACCTCACAGTCAACATGGCTGTCTCCGTGCTTCGTCCTAAGAGCAGTGATTCTGAAGCTCTCCTCAGCCTGGAtggtcccctcagccagctgtaGTTCCTCAGGGCAGCGGAACTCTGGCTGGCCCAGGCACTCAGGGCTGATACACACTGAGTCAACAATCTCCTGTATACTGGCGTATGGCCTCTTGTCGGCCACGATCCTGAAAAGGCCTGGATAGTCgagagatagatctactgtcataGATTTGGAACCCTCAGACTGAAGTTCCACAATGAGTCTGGTGACACTGATCCCAATGATCTTCAGGAGCTCTCCATAGGAGAAACTCCACTCTCTTCCAAACAGCTCATACACAGAACCTGGTAGAAAGACATTTCAATGGATCTATTCTTTTGGCAATGAATGAACCTAAGTACAGTCGTCGATGGTCTATTCTCCTTGTAGAGTAACAGATCCAAGTAAGTAAGAACATAAGGGTGGTAACTCTATAATTGCTACACATGAATAAGCATGAATAATTCATTTATTAAGAATTTATATACTATTCATGAAAACGTATACATTTT

Function

NR:

description
protein THEMIS-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU776506 True 1563 lncRNA 0.51 3 19167096 19169880

Neighbor

gene id symbol gene type direction distance location
LOC110529547 LOC106571352 coding upstream 5457 19157262 ~ 19161639 (+)
LOC118965498 lrp11 coding upstream 218990 18943159 ~ 18948106 (+)
LOC110529539 LOC106571303 coding upstream 230598 18924998 ~ 18936498 (+)
LOC110529536 LOC106571306 coding upstream 260702 18902235 ~ 18906394 (+)
LOC110529530 LOC106571309 coding upstream 290545 18806517 ~ 18876551 (+)
LOC110529202 lama2 coding downstream 204893 19374773 ~ 19537068 (+)
LOC110529203 NA coding downstream 365040 19534920 ~ 19539445 (+)
LOC110529551 LOC106607757 coding downstream 370738 19540618 ~ 19543748 (+)
LOC110529552 LOC106571356 coding downstream 422704 19592584 ~ 19632071 (+)
LOC110529553 LOC106571358 coding downstream 494157 19664037 ~ 19672737 (+)
G681898 NA non-coding upstream 17039 19149719 ~ 19150057 (+)
G681897 NA non-coding upstream 17888 19148889 ~ 19149208 (+)
G681877 NA non-coding upstream 52446 19114395 ~ 19114650 (+)
G681875 NA non-coding upstream 54882 19111416 ~ 19112214 (+)
G681874 NA non-coding upstream 56417 19110460 ~ 19110679 (+)
G682270 NA non-coding downstream 252240 19422120 ~ 19422393 (+)
G682332 NA non-coding downstream 322493 19492373 ~ 19492579 (+)
G682412 NA non-coding downstream 449059 19618939 ~ 19619194 (+)
G682413 NA non-coding downstream 449321 19619201 ~ 19619440 (+)
G682359 NA non-coding downstream 467134 19637014 ~ 19638372 (+)
G681909 NA other upstream 1456 19163936 ~ 19165640 (+)
LOC110529505 LOC106571335 other upstream 2272261 16893102 ~ 16921697 (+)
LOC110529493 LOC106571284 other upstream 2778760 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 2781151 16384802 ~ 16385945 (+)
LOC110529464 LOC106571299 other upstream 3907106 15258311 ~ 15260331 (+)
G682611 NA other downstream 558953 19728833 ~ 19729671 (+)
G683669 NA other downstream 1392995 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 1457070 20626950 ~ 20632899 (+)
G683845 NA other downstream 1537178 20707058 ~ 20707371 (+)
G684314 NA other downstream 1907190 21077070 ~ 21078871 (+)

Expression


Co-expression Network