Gene
RNA
| Item | Value |
|---|---|
| gene id | G682270 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 19422120 ~ 19422393 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU776912 | True | 274 | lncRNA | 0.51 | 1 | 19422120 | 19422393 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529547 | LOC106571352 | coding | upstream | 260481 | 19157262 ~ 19161639 (+) |
| LOC118965498 | lrp11 | coding | upstream | 474014 | 18943159 ~ 18948106 (+) |
| LOC110529539 | LOC106571303 | coding | upstream | 485622 | 18924998 ~ 18936498 (+) |
| LOC110529536 | LOC106571306 | coding | upstream | 515726 | 18902235 ~ 18906394 (+) |
| LOC110529530 | LOC106571309 | coding | upstream | 545569 | 18806517 ~ 18876551 (+) |
| LOC110529203 | NA | coding | downstream | 112527 | 19534920 ~ 19539445 (+) |
| LOC110529551 | LOC106607757 | coding | downstream | 118225 | 19540618 ~ 19543748 (+) |
| LOC110529552 | LOC106571356 | coding | downstream | 170191 | 19592584 ~ 19632071 (+) |
| LOC110529553 | LOC106571358 | coding | downstream | 241644 | 19664037 ~ 19672737 (+) |
| akap7 | LOC106571361 | coding | downstream | 410498 | 19832891 ~ 19863963 (+) |
| G681902 | NA | non-coding | upstream | 252240 | 19167096 ~ 19169880 (+) |
| G681898 | NA | non-coding | upstream | 272063 | 19149719 ~ 19150057 (+) |
| G681897 | NA | non-coding | upstream | 272912 | 19148889 ~ 19149208 (+) |
| G681877 | NA | non-coding | upstream | 307470 | 19114395 ~ 19114650 (+) |
| G681875 | NA | non-coding | upstream | 309906 | 19111416 ~ 19112214 (+) |
| G682332 | NA | non-coding | downstream | 69980 | 19492373 ~ 19492579 (+) |
| G682412 | NA | non-coding | downstream | 196546 | 19618939 ~ 19619194 (+) |
| G682413 | NA | non-coding | downstream | 196808 | 19619201 ~ 19619440 (+) |
| G682359 | NA | non-coding | downstream | 214621 | 19637014 ~ 19638372 (+) |
| G682424 | NA | non-coding | downstream | 225360 | 19647753 ~ 19648041 (+) |
| G681909 | NA | other | upstream | 256480 | 19163936 ~ 19165640 (+) |
| LOC110529505 | LOC106571335 | other | upstream | 2527285 | 16893102 ~ 16921697 (+) |
| LOC110529493 | LOC106571284 | other | upstream | 3033784 | 16387411 ~ 16390869 (+) |
| G678417 | LOC106571283 | other | upstream | 3036175 | 16384802 ~ 16385945 (+) |
| LOC110529464 | LOC106571299 | other | upstream | 4162130 | 15258311 ~ 15260331 (+) |
| G682611 | NA | other | downstream | 306440 | 19728833 ~ 19729671 (+) |
| G683669 | NA | other | downstream | 1140482 | 20562875 ~ 20563434 (+) |
| G683757 | LOC106571373 | other | downstream | 1204557 | 20626950 ~ 20632899 (+) |
| G683845 | NA | other | downstream | 1284665 | 20707058 ~ 20707371 (+) |
| G684314 | NA | other | downstream | 1654677 | 21077070 ~ 21078871 (+) |
