XLOC_026071 (BX005085.4)


Basic Information

Item Value
gene id XLOC_026071
gene name BX005085.4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 7152770 ~ 7170661 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050976
TGAAGCTCCTCCTCCTTCAGTTCAGCTATAAACACAGGAATATTCCCATCAGGATCAAGTGAAGAGTTtactgaaggacagtgagaacatgagtgatccagaaccctgcagaattaaacatgaAGATGCTGAACAACAAATAGacctaattgaagaaaATTGTGTGAGTAAAgaagaggaacatcatgtcaaaattgaggaaaaaaatcatTTACAGACTTGCGGTATTTTGAAAACAAGAGACGAGAGTCATTTcatctgcactcagtgtgggaagagcttcagaCAATCATCAATCCTTAatagacacatgaagatccacactggagagaaaccattcacatgcactgagtgtgggaagagttgtAGAGGAAAAGgcgatcttaagattcacatgaggatccacactggagagaaaccattcacctgcactcagtgtgggaagaatttcaGACAAATttcaaaccttaatcaacacatgatgatccacactggagagaaaccattcacatgttctcagtgtgggaagagcttcagcCAACCATTACACCTTAAACTACACATGAatatccacactggagagaaacaaTTCACCTGCACTCGgtgtgggaagagcttcagccaatcatcactccttaataaacacatgaagatccacactggagagaaaccattcacatgttctCAGTGTGGGAAGGGCTTTATCTTCTCATCATACCTTAGtaaacacatgagaatccacactggagagaaaccgttcatatgcactcagtgtgggaagagtttctgcCAGTCATCACAATTCactcaacacatgaggatccacaccggagagaaaccgttcacatgttcTCAGTGTGGGAAGGGATTTAGCCAATCATCGAACCTTAATaagcacatgaggatccacactggagaaagacCGTTCATTtgcgctcagtgtgggaagagtttctgcCAGTCATCAcagcttaatcaacacatgattaTCCACACCACAGAGCAACCATTcatatgcactcagtgtgggaagagcttttGTCAATCTTCACTCCTTAATCTACACCTGAGGATCcacgctggagagaaaccattcacatgtactcagtgtgggaagagtttcagccgatcatccAACCTTAATCAgcacatgaagattcacactggagagaaaccattcacatgcactcagtgtgggaagaaattcagccgatcatcatcccttaatcaacacatgaggaaccacactggagcaggcatgggacaataactgttttcaaggtataccacagttaggaaaagtcaaggtttttaaaaccgccaaaatttttcacatttttttaagtacaacagtatctccagcagaaaagatatctatATTGTCTTTTTAAATTTTAAGTAAATCTGTGTTTCTAaatctaatgaagacagcagaagtcaatgattcatttgaattattcagcctgacatgtttactgctccacaatattttaaatgtttctcaaattaaaatattttgtgttcaaaaggggaAAGGTTGTAGTTTTTTACCCGGAAATTTATAAAGAGTGTTTATTAGAGCAGTAAGCACAATAACGTCAAACTATGATTTAATACCAGCCATTGCCTACACTGcagagagaccattcacatgtCCTCAgggtgggaagagtttcagccgatcaaCACACCATCATACACGCATGAAGAATCGATTAAGTTGTTTATGATTCAATCGGTAAAAGTTAttatcccaacaatgactgatgCAACAAAAATTAGACGGTtgattaaattacaatttaatatattgtttattaacaGAAACAGATGACGCATTTGaccttaaattaaaacaaatagaaaaatacatttaaaaagactaATCTGTTTAAGGTCTGGCATTAAGAGGTGAATTAAATGTGCAAAACATAAACTAAAATATACACAACAACTTCCAGCAAGTCTAAAATAATTGTGAAACTTTCaaggtttttttggggggggaagGGGGGGAGGTGATACTTATTCTGGTGATTGAATATGCTGGTTGTGTTGCCAGATTTGGTTTTCACAAGCTCTGCTCCAGTGTTTTTCAATCAATATTACAATATCCTTTTTAACATCCTCAGACTGGAGCAAagaattgtttaattttgcaGAGAGACAAACTCCAAGAGAAACATCACGGTAATCTGTAAGCGGAGAAGCGTGGATatcaattagggctgggcgatttttccgattttatttcgattaattcgaatttacgttttaagacgatttaattttgaatcaaatcgaaAAAtcgtgattttaaaaaaatatatataattaatacattataatggcaccaatgcgctttggttcactctctgtatgaagcagaaagcacaccagaagcgcctctccaccgcgcagcaccacgcagcgccatggattttagaattctaaacaggtttctaaaCACACACCGGAGCCGCCCAGcctcagtcatgttgttgtaatgttttgagaagactagtaacacataaaaaaaaattgaaatcgtgaatcggtcaaactttataaaaaaacctagattcttttttttttttttgctaaatcgcccagccctaatatcaATTGATTTACAGTTACTAGCGGCGCTCTGAGAAACTAACCAAAAGTCTATTCGAGATTTGTTTAGAATCATCCTTGCTGCACCATGTGTAGAGTTTCTgttgtggattttttttctctccagatCTCGACAACAGAAAATCTCAACAGAAAAATATTTAGAATTGAATTTGTAGAGGCGGCTCTGGAGGAAAACCTATATAATTCACCGTTTATTACCATATTGAAGTCTCCGCCCAAAATAATGAAAGATTTAGGAAATTTGTCCACCCAATATTGAATTTTATCACTGATCTGGTTCAATAAAATTTATATTCTTCTTAGAAGTGTTGTACCCGTATATATTTACTACAATTGAAATATTTTGCCAAAGTGATGCAACAAGCAATAGAAAGTGACTCTTATCATCACTAACAAAATGCAAAATCTTCCCACAAaacttgcttttaaaaataacgACAACTGCTGACCGTTCTGTCCCATGAGACATCCGCATATCAGTCCCCATTGAGATCTCCACAATTTAGCATCCTCCTTGACTGAATGGGTTTCTTGAAAAAGCTAAAGTCTAAACCATAGTTttaccaaacaaaaaaaagtgctgtGCGCTTAACACTGTTTCCTAGACCCCTGACAATAGcgcctttcacacagtgataccagtaaatatctggaaaatttccggaacgactttaccggtatattcaaaaaagcgctgttcacacaggcgaggacgttacggaaattttccggaaaagagcattcacacatccattccaaaataccggtaaattctgacatcattcaccacaaatgagccttaaacggctgcgcttgtatttgtaaacatttgagtacattacaaactctgtggatgatcaatattgagaacaacttcaatgaaaacatat

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000110003

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050976 True 3533 mRNA 0.38 2 7152770 7170661

Neighbor

gene id symbol gene type direction distance location
XLOC_026070 BX005085.5 coding downstream 5544 7141360 ~ 7147226 (-)
XLOC_026069 BX005085.6 coding downstream 18657 7133388 ~ 7134113 (-)
XLOC_026068 BX005085.1 coding downstream 23713 7123912 ~ 7129057 (-)
XLOC_026065 NA coding downstream 31400 7083507 ~ 7121370 (-)
XLOC_026067 BX005085.7 coding downstream 33277 7111704 ~ 7119493 (-)
XLOC_026072 FO704858.1 coding upstream 74509 7245170 ~ 7254636 (-)
XLOC_026073 zgc:113102 coding upstream 92548 7263209 ~ 7271258 (-)
XLOC_026074 zgc:173577 coding upstream 105771 7276432 ~ 7283867 (-)
XLOC_026075 si:ch1073-186o8.3 coding upstream 124803 7295464 ~ 7296189 (-)
XLOC_026076 zgc:113443 coding upstream 128480 7299141 ~ 7343549 (-)
XLOC_026064 NA non-coding downstream 74951 7050519 ~ 7077819 (-)
XLOC_026058 FP016106.1 non-coding downstream 555575 6556960 ~ 6597195 (-)
XLOC_026056 NA non-coding downstream 623616 6525698 ~ 6529154 (-)
XLOC_026052 NA non-coding downstream 775832 6308693 ~ 6376938 (-)
XLOC_026077 NA non-coding upstream 174449 7345110 ~ 7346494 (-)
XLOC_026081 NA non-coding upstream 307142 7477803 ~ 7537078 (-)
XLOC_026082 NA non-coding upstream 308768 7479429 ~ 7493771 (-)
XLOC_026086 NA non-coding upstream 648792 7819453 ~ 7821608 (-)
XLOC_026096 NA non-coding upstream 871051 8041712 ~ 8081361 (-)

Expression


Co-expression Network