G682413


Basic Information

Item Value
gene id G682413
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 19619201 ~ 19619440 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU777066
GTATttagttgattttattcaaacacaTTTGTGTCTACAGTGTGCCTACAGTcgtggtcaaaagttttgagaatgacacaaatattaatttccacaaagtttgctacttcagtgtctttagatatttttgtcagatgttactatggagtactgaagtataattacaagcatttcataagtgtcaaaagcttttattgacaattacatgaagttgatgcaaagagtcaatatttgcagtgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU777066 True 240 lncRNA 0.31 1 19619201 19619440

Neighbor

gene id symbol gene type direction distance location
LOC110529551 LOC106607757 coding upstream 75453 19540618 ~ 19543748 (+)
LOC110529203 NA coding upstream 79756 19534920 ~ 19539445 (+)
LOC110529202 lama2 coding upstream 82133 19374773 ~ 19537068 (+)
LOC110529547 LOC106571352 coding upstream 457562 19157262 ~ 19161639 (+)
LOC118965498 lrp11 coding upstream 671095 18943159 ~ 18948106 (+)
LOC110529553 LOC106571358 coding downstream 44597 19664037 ~ 19672737 (+)
akap7 LOC106571361 coding downstream 213451 19832891 ~ 19863963 (+)
LOC118965655 NA coding downstream 256493 19875933 ~ 19875988 (+)
LOC118965499 NA coding downstream 308312 19927752 ~ 19930247 (+)
LOC101268947 il20r1b coding downstream 312993 19932433 ~ 19937792 (+)
G682412 NA non-coding upstream 7 19618939 ~ 19619194 (+)
G682332 NA non-coding upstream 126622 19492373 ~ 19492579 (+)
G682270 NA non-coding upstream 196808 19422120 ~ 19422393 (+)
G681902 NA non-coding upstream 449321 19167096 ~ 19169880 (+)
G681898 NA non-coding upstream 469144 19149719 ~ 19150057 (+)
G682359 NA non-coding downstream 17574 19637014 ~ 19638372 (+)
G682424 NA non-coding downstream 28313 19647753 ~ 19648041 (+)
G682425 NA non-coding downstream 28763 19648203 ~ 19648495 (+)
G682605 NA non-coding downstream 247660 19867100 ~ 19868203 (+)
G681909 NA other upstream 453561 19163936 ~ 19165640 (+)
LOC110529505 LOC106571335 other upstream 2724366 16893102 ~ 16921697 (+)
LOC110529493 LOC106571284 other upstream 3230865 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 3233256 16384802 ~ 16385945 (+)
LOC110529464 LOC106571299 other upstream 4359211 15258311 ~ 15260331 (+)
G682611 NA other downstream 109393 19728833 ~ 19729671 (+)
G683669 NA other downstream 943435 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 1007510 20626950 ~ 20632899 (+)
G683845 NA other downstream 1087618 20707058 ~ 20707371 (+)
G684314 NA other downstream 1457630 21077070 ~ 21078871 (+)

Expression


Co-expression Network