G682735


Basic Information

Item Value
gene id G682735
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 19937965 ~ 19939193 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU777414
tgccttgatgacagctttgcattctctcaaccagcttcacctggaatgcttttccaacagtcttgaaggagttcccacatatgctgagcacttgttggctgcttttccttaactctgcggtccaactcatcccaaactatctcaattgggttgaggttgggtgattgtggaggccaggtcatctgatgcagcactccatcactctccttgttcaaatagccctttcacagcctggaggtgtgttttgggtcattgtcctgttgaaaaacaaattatagtcccactaagcacaaaccagatgggatggcctattgcggcagaatgctgtggtagctatgctggttaagtgtgccttgaattctaaataaatcacaggcagtgtcaccagaaaagctccatcacacctcctcctccatgcttcatggtgggaaccacaagTGCAGAGATAATTTGTTCACCGACTCCCAAAAACACTTTACCAAAAATCAAGAATTTGGAGTTATCAgaataaaggacagatttccaccactCTAATTTCCAATGctcctgtttcttggcccaagcaggtcTATACTTCTTATTGGTgccctttagtagttgtttctttgcagcaatttgaccatgaagacctgattcccacagtctccactgaacagttgatgtggagatgtgtctgttacttgaactctgtgaagcatttatttgggctgcaatttctgaggctggtaactctaatgaacttatcctctgcagcagaagtaactctgggtcttcctttcctgtggtggtcctcatgagagccaatttcattatagcgcttgatggtttttgcgattgcacttgaagaaatgttcaaagttcttgacattttccgcaatgactgaccttcatgtcttaaagtaataatggactttaatttctctttgcttatttgagctgttcttgccataatattgacttggtttttaccaaataaggctatcttctgtataccacccataccttgtcacaacacaactgattggctcaaatgcattaaggaaatatATTCCACtaatttacttttaacaaggcacacctgttaattgaaatgtaagcgactacctcatgaagctggttgagaaaatgccaagagtgtgcaaagctgtcatcaaggcaaagggtggctattatGAAGCGTCTGAAATATAgaatatatattgatttgtttaacacttttttggttacta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU777414 True 1229 lncRNA 0.41 1 19937965 19939193

Neighbor

gene id symbol gene type direction distance location
LOC101268947 il20r1b coding upstream 173 19932433 ~ 19937792 (+)
LOC118965499 NA coding upstream 7718 19927752 ~ 19930247 (+)
LOC118965655 NA coding upstream 61977 19875933 ~ 19875988 (+)
akap7 LOC106571361 coding upstream 75939 19832891 ~ 19863963 (+)
LOC110529553 LOC106571358 coding upstream 265228 19664037 ~ 19672737 (+)
LOC110529562 NA coding downstream 112347 20051540 ~ 20060435 (+)
LOC110529565 NA coding downstream 355446 20294639 ~ 20379353 (+)
LOC110529573 serc1 coding downstream 531964 20471157 ~ 20477447 (+)
LOC110529577 LOC106571536 coding downstream 696212 20635405 ~ 20637793 (+)
LOC110529580 tbc1d32 coding downstream 715966 20652867 ~ 20682999 (+)
G682605 NA non-coding upstream 69762 19867100 ~ 19868203 (+)
G682425 NA non-coding upstream 289470 19648203 ~ 19648495 (+)
G682424 NA non-coding upstream 289924 19647753 ~ 19648041 (+)
G682359 NA non-coding upstream 299593 19637014 ~ 19638372 (+)
G682734 NA non-coding downstream 400 19939593 ~ 19940086 (+)
G682923 NA non-coding downstream 11354 19950547 ~ 19950908 (+)
G682925 NA non-coding downstream 13013 19952206 ~ 19952430 (+)
G682941 NA non-coding downstream 28588 19967781 ~ 19968082 (+)
G682972 NA non-coding downstream 63479 20002672 ~ 20002953 (+)
G682611 NA other upstream 208294 19728833 ~ 19729671 (+)
G681909 NA other upstream 772325 19163936 ~ 19165640 (+)
LOC110529505 LOC106571335 other upstream 3043130 16893102 ~ 16921697 (+)
LOC110529493 LOC106571284 other upstream 3549629 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 3552020 16384802 ~ 16385945 (+)
G683669 NA other downstream 623682 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 687757 20626950 ~ 20632899 (+)
G683845 NA other downstream 767865 20707058 ~ 20707371 (+)
G684314 NA other downstream 1137877 21077070 ~ 21078871 (+)
LOC110529590 LOC106571388 other downstream 1480155 21406192 ~ 21424564 (+)

Expression


Co-expression Network