XLOC_026074 (zgc:173577)


Basic Information

Item Value
gene id XLOC_026074
gene name zgc:173577
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 7276432 ~ 7283867 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050979
TAAACTCGTGTTGAAGATGAGAAGAAACAAAGAGGCTACACTTCAGCTTTTATCAACTCTAGAGAGATTATTTAGCGAACACGACACAACTCCTGCCTTTCTTCATTATATCCTGGCTCTTGACTGTCAATTCCTCTGTGAAAGCGATCAGGAATAGCGGACTTTTACCGTGTTCATATGTAAACAGgccTGATGGAGGAGACACATGAGAAAATCAAAGAAAACTCACTGAAGAGAAAAGACAAAAAGTgtgtcacctgcactcagtgtggaacaAGTCTCTTTAACAAACAGAGTCTCAGtgatcacatgatgatccacaccggagagaaaccattcacatgcactcattgtgggatgagtttcagacACTCATCAAACTTTGGTAGACACATGTtggtccacactggagagaaaacacaccaATGTGATCAGTGCGGGAAAACATTTTTGAGGGCTTCAGGGCTGAAGAAACACCTTCGAGTTCATACAGAGGGGAAGCCTTATTCATGCACTGTGTGTGGAAAGACTTTCAGACATGAAGATGGTTTAAGAGatcatcagaagatccacaccggtGTGGGAGTTTATATTTGCTTGGTGTGTGAGAAGACCTTTATTACGGCTGTAAAATTGAAAATacatgagaggactcacactggagagaaaccttacaagtgttcacactgtgaaaAGAGATTCAGTCAGTTAGGAAGCCTGAATAAACACAAGatgattcacaccggagagaaaccgtacaagtgttcataCTGTGACAAGTGTTTCAATCGGTCAGGAATCTTAAAAAAACAtgagagaattcacactggagagaaaccttacaagtgttcacactgcgacaagagattcaatCAGTCGGGAATTCTGAAAGcacatgagaggactcacactggagagaaaccttacatgTGTTCACACTGTGGCAAGAGATTCGGTCATTTATTCAGCCTGACAACACATAAAAGGATTCACGCTAGAGAGAAACCTTGTAACCTTGAAGGTGTAAAGTCGCCATAGTCTAACAAGACTGCATATCTGCTTTGTTTCCCTTTTGGTCGGTAGTCCTCAACCACCGGGCTTGAGACCATTACCGGTCCATGGATCAATTAGTATGGGGCTacacaagaaataataaataaaacggaaataattaatga

Function

symbol description
zgc:173577 Predicted to enable metal ion binding activity. Predicted to be involved in regulation of gene expression. Predicted to be active in nucleus. Orthologous to several human genes including ZNF530 (zinc finger protein 530); ZNF572 (zinc finger protein 572); and ZNF852 (zinc finger protein 852).

GO:

id name namespace
GO:0010468 regulation of gene expression biological_process
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0042054 histone methyltransferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-071004-55 Predicted to enable metal ion binding activity. Predicted to be involved in regulation of gene expression. Predicted to be active in nucleus. Orthologous to several human genes including ZNF530 (zinc finger protein 530); ZNF572 (zinc finger protein 572); and ZNF852 (zinc finger protein 852).

Ensembl:

ensembl_id ENSDARG00000098923

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050979 True 1178 mRNA 0.42 2 7276432 7283867

Neighbor

gene id symbol gene type direction distance location
XLOC_026073 zgc:113102 coding downstream 5174 7263209 ~ 7271258 (-)
XLOC_026072 FO704858.1 coding downstream 21796 7245170 ~ 7254636 (-)
XLOC_026071 BX005085.4 coding downstream 105771 7152770 ~ 7170661 (-)
XLOC_026070 BX005085.5 coding downstream 129206 7141360 ~ 7147226 (-)
XLOC_026069 BX005085.6 coding downstream 142319 7133388 ~ 7134113 (-)
XLOC_026075 si:ch1073-186o8.3 coding upstream 11597 7295464 ~ 7296189 (-)
XLOC_026076 zgc:113443 coding upstream 15274 7299141 ~ 7343549 (-)
XLOC_026077 NA coding upstream 61243 7345110 ~ 7346494 (-)
XLOC_026078 zgc:173517 coding upstream 111307 7395174 ~ 7405452 (-)
XLOC_026079 CR847850.1 coding upstream 151935 7435802 ~ 7436932 (-)
XLOC_026065 NA non-coding downstream 155062 7083507 ~ 7121370 (-)
XLOC_026064 NA non-coding downstream 198613 7050519 ~ 7077819 (-)
XLOC_026058 FP016106.1 non-coding downstream 679237 6556960 ~ 6597195 (-)
XLOC_026056 NA non-coding downstream 747278 6525698 ~ 6529154 (-)
XLOC_026052 NA non-coding downstream 899494 6308693 ~ 6376938 (-)
XLOC_026081 NA non-coding upstream 193936 7477803 ~ 7537078 (-)
XLOC_026082 NA non-coding upstream 195562 7479429 ~ 7493771 (-)
XLOC_026086 NA non-coding upstream 535586 7819453 ~ 7821608 (-)
XLOC_026096 NA non-coding upstream 757845 8041712 ~ 8081361 (-)

Expression


Co-expression Network