G683017


Basic Information

Item Value
gene id G683017
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 20030178 ~ 20030524 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU777762
GAATTATTCATTACAAATTACCATTGGAATGAAGCTTTTTACTCGCTCCACTGCATCCACATAcactatatttacaaaagtatgtggacatcccttcaaattagtgaattccaactctatattaatgcccgtgactttggaatgagatgttcaatgagcatgtccaaatacttttggttatgtagtgtatttaAATCCACCATGTAAACCTTTATGGTTTAAGTCTTTAAACAGTCAGTGAAGGTCAATGGTAGGAGTGTGTAATTTTGTCACGTTTAATAAGAAAAGGTTGATTACATCACTGTCTTTCAAGCACATACAAAGCATCATCCTACTTAGAGAATAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU777762 True 347 lncRNA 0.34 1 20030178 20030524

Neighbor

gene id symbol gene type direction distance location
LOC101268947 il20r1b coding upstream 92386 19932433 ~ 19937792 (+)
LOC118965499 NA coding upstream 99931 19927752 ~ 19930247 (+)
LOC118965655 NA coding upstream 154190 19875933 ~ 19875988 (+)
akap7 LOC106571361 coding upstream 168152 19832891 ~ 19863963 (+)
LOC110529553 LOC106571358 coding upstream 357441 19664037 ~ 19672737 (+)
LOC110529562 NA coding downstream 21016 20051540 ~ 20060435 (+)
LOC110529565 NA coding downstream 264115 20294639 ~ 20379353 (+)
LOC110529573 serc1 coding downstream 440633 20471157 ~ 20477447 (+)
LOC110529577 LOC106571536 coding downstream 604881 20635405 ~ 20637793 (+)
LOC110529580 tbc1d32 coding downstream 624635 20652867 ~ 20682999 (+)
G683015 NA non-coding upstream 1165 20028813 ~ 20029013 (+)
G682972 NA non-coding upstream 27225 20002672 ~ 20002953 (+)
G682941 NA non-coding upstream 62096 19967781 ~ 19968082 (+)
G682925 NA non-coding upstream 77748 19952206 ~ 19952430 (+)
G682923 NA non-coding upstream 79270 19950547 ~ 19950908 (+)
G683024 NA non-coding downstream 5485 20036009 ~ 20036312 (+)
G683065 NA non-coding downstream 79613 20110137 ~ 20110418 (+)
G683070 NA non-coding downstream 86195 20116719 ~ 20148567 (+)
G683147 NA non-coding downstream 181710 20212234 ~ 20234414 (+)
G683193 NA non-coding downstream 239597 20270121 ~ 20270348 (+)
G682611 NA other upstream 300507 19728833 ~ 19729671 (+)
G681909 NA other upstream 864538 19163936 ~ 19165640 (+)
LOC110529505 LOC106571335 other upstream 3135343 16893102 ~ 16921697 (+)
LOC110529493 LOC106571284 other upstream 3641842 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 3644233 16384802 ~ 16385945 (+)
G683669 NA other downstream 532351 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 596426 20626950 ~ 20632899 (+)
G683845 NA other downstream 676534 20707058 ~ 20707371 (+)
G684314 NA other downstream 1046546 21077070 ~ 21078871 (+)
LOC110529590 LOC106571388 other downstream 1388824 21406192 ~ 21424564 (+)

Expression


Co-expression Network