G683024


Basic Information

Item Value
gene id G683024
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 20036009 ~ 20036312 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU777769
gaataatagtgaagacatcataactgtcacgccctgaccttagagatcctttaaattctctatttggtaggtcagggtgtgattatatttctttgttggccgagtatggttcccaatcagaggcagctgtctatcattgtctctgattggggatcatacttaggcagccctttttcccaccttctgttgtgggatcttgtctttgtgtgTTGCATGTGTTTGCACTCCTTGCTTTATGTTCgttgagttgtttattgtttttggtggaacatttcaaatgaaagaaaatgtacgcctcccacgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU777769 True 304 lncRNA 0.42 1 20036009 20036312

Neighbor

gene id symbol gene type direction distance location
LOC101268947 il20r1b coding upstream 98217 19932433 ~ 19937792 (+)
LOC118965499 NA coding upstream 105762 19927752 ~ 19930247 (+)
LOC118965655 NA coding upstream 160021 19875933 ~ 19875988 (+)
akap7 LOC106571361 coding upstream 173983 19832891 ~ 19863963 (+)
LOC110529553 LOC106571358 coding upstream 363272 19664037 ~ 19672737 (+)
LOC110529562 NA coding downstream 15228 20051540 ~ 20060435 (+)
LOC110529565 NA coding downstream 258327 20294639 ~ 20379353 (+)
LOC110529573 serc1 coding downstream 434845 20471157 ~ 20477447 (+)
LOC110529577 LOC106571536 coding downstream 599093 20635405 ~ 20637793 (+)
LOC110529580 tbc1d32 coding downstream 618847 20652867 ~ 20682999 (+)
G683017 NA non-coding upstream 5485 20030178 ~ 20030524 (+)
G683015 NA non-coding upstream 6996 20028813 ~ 20029013 (+)
G682972 NA non-coding upstream 33056 20002672 ~ 20002953 (+)
G682941 NA non-coding upstream 67927 19967781 ~ 19968082 (+)
G682925 NA non-coding upstream 83579 19952206 ~ 19952430 (+)
G683065 NA non-coding downstream 73825 20110137 ~ 20110418 (+)
G683070 NA non-coding downstream 80407 20116719 ~ 20148567 (+)
G683147 NA non-coding downstream 175922 20212234 ~ 20234414 (+)
G683193 NA non-coding downstream 233809 20270121 ~ 20270348 (+)
G683196 NA non-coding downstream 242735 20279047 ~ 20279250 (+)
G682611 NA other upstream 306338 19728833 ~ 19729671 (+)
G681909 NA other upstream 870369 19163936 ~ 19165640 (+)
LOC110529505 LOC106571335 other upstream 3141174 16893102 ~ 16921697 (+)
LOC110529493 LOC106571284 other upstream 3647673 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 3650064 16384802 ~ 16385945 (+)
G683669 NA other downstream 526563 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 590638 20626950 ~ 20632899 (+)
G683845 NA other downstream 670746 20707058 ~ 20707371 (+)
G684314 NA other downstream 1040758 21077070 ~ 21078871 (+)
LOC110529590 LOC106571388 other downstream 1383036 21406192 ~ 21424564 (+)

Expression


Co-expression Network