G683147


Basic Information

Item Value
gene id G683147
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 20212234 ~ 20234414 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU777903
gatgtgcaggggtacgaggtaataacatggttatatacagggagtaccagtactgagttgatgtgcaggggtacgaggtaataacatggttatatacagggagtaccagtactgagtcgatgtgcaggggtacgaggtaataacatggttatatacagggagtaccagtactcagtcgatgtgcaggggtatgaggtaataacatggttatatacagggagtaccagtactgagtcgatgtgcagcggtacgaggtaataacatggttatatacagggagtaccagtactgagtcgatgtgcagcggtatgaggtaataacatggttagatacaggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU777903 True 337 lncRNA 0.45 4 20212234 20234414

Neighbor

gene id symbol gene type direction distance location
LOC110529562 NA coding upstream 151799 20051540 ~ 20060435 (+)
LOC101268947 il20r1b coding upstream 274442 19932433 ~ 19937792 (+)
LOC118965499 NA coding upstream 281987 19927752 ~ 19930247 (+)
LOC118965655 NA coding upstream 336246 19875933 ~ 19875988 (+)
akap7 LOC106571361 coding upstream 350208 19832891 ~ 19863963 (+)
LOC110529565 NA coding downstream 60225 20294639 ~ 20379353 (+)
LOC110529573 serc1 coding downstream 236743 20471157 ~ 20477447 (+)
LOC110529577 LOC106571536 coding downstream 400991 20635405 ~ 20637793 (+)
LOC110529580 tbc1d32 coding downstream 420745 20652867 ~ 20682999 (+)
LOC110529582 LOC106571376 coding downstream 591100 20825514 ~ 20992358 (+)
G683070 NA non-coding upstream 63667 20116719 ~ 20148567 (+)
G683065 NA non-coding upstream 101816 20110137 ~ 20110418 (+)
G683024 NA non-coding upstream 175922 20036009 ~ 20036312 (+)
G683017 NA non-coding upstream 181710 20030178 ~ 20030524 (+)
G683015 NA non-coding upstream 183221 20028813 ~ 20029013 (+)
G683193 NA non-coding downstream 35707 20270121 ~ 20270348 (+)
G683196 NA non-coding downstream 44633 20279047 ~ 20279250 (+)
G683197 NA non-coding downstream 45064 20279478 ~ 20279706 (+)
G683466 NA non-coding downstream 178495 20412909 ~ 20413122 (+)
G682611 NA other upstream 482563 19728833 ~ 19729671 (+)
G681909 NA other upstream 1046594 19163936 ~ 19165640 (+)
LOC110529505 LOC106571335 other upstream 3317399 16893102 ~ 16921697 (+)
LOC110529493 LOC106571284 other upstream 3823898 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 3826289 16384802 ~ 16385945 (+)
G683669 NA other downstream 328461 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 392536 20626950 ~ 20632899 (+)
G683845 NA other downstream 472644 20707058 ~ 20707371 (+)
G684314 NA other downstream 842656 21077070 ~ 21078871 (+)
LOC110529590 LOC106571388 other downstream 1184934 21406192 ~ 21424564 (+)

Expression


Co-expression Network