G683193


Basic Information

Item Value
gene id G683193
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 20270121 ~ 20270348 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU777950
gatccctgctggtcatctatgaacgtttgaacatcttgaagaacaatctggccttaaatggccatgtaccctttaatctccacctggcacagccagtagaggacctgccacccctcagagcctggttcctctctaggtttcttcctaggttcctgtctttctagggaattttttctacatctgcattgctttgtgtttggggtttttggctgggtttctgtatagcac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU777950 True 228 lncRNA 0.47 1 20270121 20270348

Neighbor

gene id symbol gene type direction distance location
LOC110529562 NA coding upstream 209686 20051540 ~ 20060435 (+)
LOC101268947 il20r1b coding upstream 332329 19932433 ~ 19937792 (+)
LOC118965499 NA coding upstream 339874 19927752 ~ 19930247 (+)
LOC118965655 NA coding upstream 394133 19875933 ~ 19875988 (+)
akap7 LOC106571361 coding upstream 408095 19832891 ~ 19863963 (+)
LOC110529565 NA coding downstream 24291 20294639 ~ 20379353 (+)
LOC110529573 serc1 coding downstream 200809 20471157 ~ 20477447 (+)
LOC110529577 LOC106571536 coding downstream 365057 20635405 ~ 20637793 (+)
LOC110529580 tbc1d32 coding downstream 384811 20652867 ~ 20682999 (+)
LOC110529582 LOC106571376 coding downstream 555166 20825514 ~ 20992358 (+)
G683147 NA non-coding upstream 35707 20212234 ~ 20234414 (+)
G683070 NA non-coding upstream 121554 20116719 ~ 20148567 (+)
G683065 NA non-coding upstream 159703 20110137 ~ 20110418 (+)
G683024 NA non-coding upstream 233809 20036009 ~ 20036312 (+)
G683017 NA non-coding upstream 239597 20030178 ~ 20030524 (+)
G683196 NA non-coding downstream 8699 20279047 ~ 20279250 (+)
G683197 NA non-coding downstream 9130 20279478 ~ 20279706 (+)
G683466 NA non-coding downstream 142561 20412909 ~ 20413122 (+)
G683477 NA non-coding downstream 166948 20437296 ~ 20439013 (+)
G682611 NA other upstream 540450 19728833 ~ 19729671 (+)
G681909 NA other upstream 1104481 19163936 ~ 19165640 (+)
LOC110529505 LOC106571335 other upstream 3375286 16893102 ~ 16921697 (+)
LOC110529493 LOC106571284 other upstream 3881785 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 3884176 16384802 ~ 16385945 (+)
G683669 NA other downstream 292527 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 356602 20626950 ~ 20632899 (+)
G683845 NA other downstream 436710 20707058 ~ 20707371 (+)
G684314 NA other downstream 806722 21077070 ~ 21078871 (+)
LOC110529590 LOC106571388 other downstream 1149000 21406192 ~ 21424564 (+)

Expression


Co-expression Network