G683633


Basic Information

Item Value
gene id G683633
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 20530859 ~ 20531075 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU778484
GGCATAGGGCGAACTGCACCCTCCCAGcaccccggagacacagcacgcagcgcCGGTGCAGGATACCTTGGGCCGAAACGGCGTACCGGAGACCAAACACGCTGGGCCGGCACAATatgccctggctggatgcccactctcgcatggcacttgcgggggactggcctatagcgcaccgggctatgagcgcgtactggcgacaccgtgcgcttaaccg

Function

NR:

description
PREDICTED: uncharacterized protein LOC106595571

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU778484 True 217 lncRNA 0.66 1 20530859 20531075

Neighbor

gene id symbol gene type direction distance location
LOC110529573 serc1 coding upstream 53412 20471157 ~ 20477447 (+)
LOC110529565 NA coding upstream 151506 20294639 ~ 20379353 (+)
LOC110529562 NA coding upstream 470424 20051540 ~ 20060435 (+)
LOC101268947 il20r1b coding upstream 593067 19932433 ~ 19937792 (+)
LOC118965499 NA coding upstream 600612 19927752 ~ 19930247 (+)
LOC110529577 LOC106571536 coding downstream 104330 20635405 ~ 20637793 (+)
LOC110529580 tbc1d32 coding downstream 124084 20652867 ~ 20682999 (+)
LOC110529582 LOC106571376 coding downstream 294439 20825514 ~ 20992358 (+)
LOC110529583 LOC106571378 coding downstream 479246 21010321 ~ 21116297 (+)
mcm9 LOC106571380 coding downstream 586304 21117379 ~ 21136825 (+)
G683599 NA non-coding upstream 21747 20508899 ~ 20509112 (+)
G683477 NA non-coding upstream 91846 20437296 ~ 20439013 (+)
G683466 NA non-coding upstream 117737 20412909 ~ 20413122 (+)
G683197 NA non-coding upstream 251153 20279478 ~ 20279706 (+)
G683671 NA non-coding downstream 32412 20563487 ~ 20563790 (+)
G683700 NA non-coding downstream 55532 20586607 ~ 20586818 (+)
G683759 NA non-coding downstream 102406 20633481 ~ 20634396 (+)
G683766 NA non-coding downstream 117979 20649054 ~ 20650803 (+)
G682611 NA other upstream 801188 19728833 ~ 19729671 (+)
G681909 NA other upstream 1365219 19163936 ~ 19165640 (+)
LOC110529505 LOC106571335 other upstream 3636024 16893102 ~ 16921697 (+)
LOC110529493 LOC106571284 other upstream 4142523 16387411 ~ 16390869 (+)
G678417 LOC106571283 other upstream 4144914 16384802 ~ 16385945 (+)
G683669 NA other downstream 31800 20562875 ~ 20563434 (+)
G683757 LOC106571373 other downstream 95875 20626950 ~ 20632899 (+)
G683845 NA other downstream 175983 20707058 ~ 20707371 (+)
G684314 NA other downstream 545995 21077070 ~ 21078871 (+)
LOC110529590 LOC106571388 other downstream 888273 21406192 ~ 21424564 (+)

Expression


Co-expression Network