G683700


Basic Information

Item Value
gene id G683700
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 20586607 ~ 20586818 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU778553
gccaaatacatttaaactcagtttttcacaattcctgacattaatccTAGGAAAAATtaaatgtcttaggtcagttaggatcaccactttactttaagaatgtgaatgtcagaataatagtagagcgaatgatttatttcagcttttatttctttcatcacattcccagtggatctgaaatttacatacactcaattagtatttggtagcat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU778553 True 212 lncRNA 0.31 1 20586607 20586818

Neighbor

gene id symbol gene type direction distance location
LOC110529573 serc1 coding upstream 109160 20471157 ~ 20477447 (+)
LOC110529565 NA coding upstream 207254 20294639 ~ 20379353 (+)
LOC110529562 NA coding upstream 526172 20051540 ~ 20060435 (+)
LOC101268947 il20r1b coding upstream 648815 19932433 ~ 19937792 (+)
LOC118965499 NA coding upstream 656360 19927752 ~ 19930247 (+)
LOC110529577 LOC106571536 coding downstream 48587 20635405 ~ 20637793 (+)
LOC110529580 tbc1d32 coding downstream 68341 20652867 ~ 20682999 (+)
LOC110529582 LOC106571376 coding downstream 238696 20825514 ~ 20992358 (+)
LOC110529583 LOC106571378 coding downstream 423503 21010321 ~ 21116297 (+)
mcm9 LOC106571380 coding downstream 530561 21117379 ~ 21136825 (+)
G683671 NA non-coding upstream 22817 20563487 ~ 20563790 (+)
G683633 NA non-coding upstream 55532 20530859 ~ 20531075 (+)
G683599 NA non-coding upstream 77495 20508899 ~ 20509112 (+)
G683477 NA non-coding upstream 147594 20437296 ~ 20439013 (+)
G683466 NA non-coding upstream 173485 20412909 ~ 20413122 (+)
G683759 NA non-coding downstream 46663 20633481 ~ 20634396 (+)
G683766 NA non-coding downstream 62236 20649054 ~ 20650803 (+)
G683783 NA non-coding downstream 100092 20686910 ~ 20687208 (+)
G683828 NA non-coding downstream 107659 20694477 ~ 20694735 (+)
G683669 NA other upstream 23173 20562875 ~ 20563434 (+)
G682611 NA other upstream 856936 19728833 ~ 19729671 (+)
G681909 NA other upstream 1420967 19163936 ~ 19165640 (+)
LOC110529505 LOC106571335 other upstream 3691772 16893102 ~ 16921697 (+)
LOC110529493 LOC106571284 other upstream 4198271 16387411 ~ 16390869 (+)
G683757 LOC106571373 other downstream 40132 20626950 ~ 20632899 (+)
G683845 NA other downstream 120240 20707058 ~ 20707371 (+)
G684314 NA other downstream 490252 21077070 ~ 21078871 (+)
LOC110529590 LOC106571388 other downstream 832530 21406192 ~ 21424564 (+)
G685215 NA other downstream 1338299 21925117 ~ 21926356 (+)

Expression


Co-expression Network