G684021


Basic Information

Item Value
gene id G684021
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 20824370 ~ 20824591 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU778909
ccgttcatctttccctcgatcctgactagtctcccagtccctgccactgaaaaacatccccacagtttcctccagacgtgactggaaggttctcccatctccacagaggaagtctagagctctgtcagagtgaacatcgggttcttggtcacctccctgaccaaggtccttctccccgattgctcagtttggtcgggcggccagctctaggaagggtgtTGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU778909 True 222 lncRNA 0.55 1 20824370 20824591

Neighbor

gene id symbol gene type direction distance location
LOC110529580 tbc1d32 coding upstream 141371 20652867 ~ 20682999 (+)
LOC110529577 LOC106571536 coding upstream 186577 20635405 ~ 20637793 (+)
LOC110529573 serc1 coding upstream 346923 20471157 ~ 20477447 (+)
LOC110529565 NA coding upstream 445017 20294639 ~ 20379353 (+)
LOC110529562 NA coding upstream 763935 20051540 ~ 20060435 (+)
LOC110529582 LOC106571376 coding downstream 923 20825514 ~ 20992358 (+)
LOC110529583 LOC106571378 coding downstream 185730 21010321 ~ 21116297 (+)
mcm9 LOC106571380 coding downstream 292788 21117379 ~ 21136825 (+)
LOC110529585 LOC106571383 coding downstream 318478 21143069 ~ 21230110 (+)
LOC110529590 LOC106571388 coding downstream 581601 21406192 ~ 21424564 (+)
G683994 NA non-coding upstream 18227 20805837 ~ 20806143 (+)
G683992 NA non-coding upstream 20056 20803967 ~ 20804314 (+)
G683990 NA non-coding upstream 21268 20802260 ~ 20803102 (+)
G683933 NA non-coding upstream 56340 20767760 ~ 20768030 (+)
G683925 NA non-coding upstream 61536 20762464 ~ 20762834 (+)
G684254 NA non-coding downstream 169857 20994448 ~ 20994661 (+)
G684267 NA non-coding downstream 183994 21008585 ~ 21008850 (+)
G684269 NA non-coding downstream 184366 21008957 ~ 21009317 (+)
G684314 NA non-coding downstream 252479 21077070 ~ 21078871 (+)
G684400 NA non-coding downstream 297547 21122138 ~ 21122872 (+)
G683845 NA other upstream 116999 20707058 ~ 20707371 (+)
G683757 LOC106571373 other upstream 191471 20626950 ~ 20632899 (+)
G683669 NA other upstream 260936 20562875 ~ 20563434 (+)
G682611 NA other upstream 1094699 19728833 ~ 19729671 (+)
G681909 NA other upstream 1658730 19163936 ~ 19165640 (+)
G685215 NA other downstream 1100526 21925117 ~ 21926356 (+)
G685311 NA other downstream 1259283 22083874 ~ 22084224 (+)
LOC110529616 LOC106586086 other downstream 1598467 22419790 ~ 22433035 (+)

Expression


Co-expression Network