G684690



Basic Information


Item Value
gene id G684690
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 21287752 ~ 21291905 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU779680
caggctctgtcgtaacccggccgcgaccgggaggtccgtggggcgacgcacaattggcctagcgtcgcccgggttagggagggcttggtcggtaggggtgtccttgtctcatcgcgcaccagcgactcctgtggcgggctgggcgcagtgtgcgctaaccaaggtggccaggtgcacagtgtttcctccggcgcattggtgcggctggcttccgggttggatgtgcgctgtgttgaagaagcagcggcttggttggttgtgtatcggaggacgcatgactttcaaccttcatctctcccgagcccgtacgggagttgtagcgatgagacaagatagtagctactacacaattggatactacgaaattggggagaaaaagggg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU779680 True 382 lncRNA 0.60 2 21287752 21291905
Loading

Neighbor


gene id symbol gene type direction distance location
si:dkeyp-114g9.1 fbos coding downstream 46602 21231292 ~ 21241150 (-)
LOC110529586 NA coding downstream 90554 21187530 ~ 21197198 (-)
LOC118965500 NA coding downstream 635208 20650227 ~ 20652544 (-)
LOC118965600 NA coding downstream 640223 20644656 ~ 20647529 (-)
LOC110529578 cx32 coding downstream 643554 20642316 ~ 20644198 (-)
LOC110529588 ngbr coding upstream 100433 21392338 ~ 21401110 (-)
LOC110529589 LOC106571387 coding upstream 110038 21401943 ~ 21406071 (-)
LOC110529592 LOC106571389 coding upstream 133714 21425619 ~ 21469294 (-)
LOC110529593 LOC106571390 coding upstream 207560 21499465 ~ 21504647 (-)
LOC110529205 LOC106571539 coding upstream 247977 21539882 ~ 21545761 (-)
G684714 NA non-coding downstream 11051 21276176 ~ 21276701 (-)
G684268 NA non-coding downstream 279127 21008334 ~ 21008625 (-)
G684258 NA non-coding downstream 288955 20998486 ~ 20998797 (-)
G684247 NA non-coding downstream 295463 20990098 ~ 20992289 (-)
G684789 NA non-coding upstream 92013 21383918 ~ 21384286 (-)
G684791 NA non-coding upstream 95225 21387130 ~ 21387516 (-)
G684792 NA non-coding upstream 95911 21387816 ~ 21388049 (-)
G684767 NA non-coding upstream 129889 21421794 ~ 21424539 (-)
G681659 NA other downstream 2495615 18791230 ~ 18792137 (-)
G679471 NA other downstream 4173224 17113543 ~ 17114528 (-)
G679210 LOC106571290 other downstream 4657493 16625090 ~ 16630259 (-)
G679087 NA other downstream 4854738 16432621 ~ 16433014 (-)
G676635 LOC106571254 other downstream 6771224 14508329 ~ 14516528 (-)
G684844 NA other upstream 186861 21478766 ~ 21479203 (-)
LOC110529207 sprtn other upstream 628522 21920427 ~ 21926307 (-)
G685953 NA other upstream 867125 22159030 ~ 22161042 (-)
LOC110529643 LOC106571435 other upstream 2325002 23614938 ~ 23659111 (-)
G687890 NA other upstream 2343404 23635309 ~ 23637408 (-)

Expression


G684690 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 20.
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G684690 Expression in each Bioproject

Bar chart with 19 bars.
G684690 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 400.
End of interactive chart.

Co-expression Network